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    GAG1 Gag1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851123, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GAG1
    Official Full Name
    Gag1p
    Primary source
    SGD:S000004399
    Locus tag
    YLR407W
    See related
    AllianceGenome:SGD:S000004399; FungiDB:YLR407W; VEuPathDB:YLR407W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be located in cell cortex. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See GAG1 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (932967..933653)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene ribosomal 60S subunit protein L31B Neighboring gene uncharacterized protein Neighboring gene Bls1p Neighboring gene rRNA-processing protein UTP21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001144.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comprehensive and quantitative analysis of yeast deletion mutants defective in apical and isotropic bud growth. Watanabe M, et al. Curr Genet, 2009 Aug. PMID 19466415
    2. Bootstrapping the interactome: unsupervised identification of protein complexes in yeast. Friedel CC, et al. J Comput Biol, 2009 Aug. PMID 19630542
    3. Identification of aluminium transport-related genes via genome-wide phenotypic screening of Saccharomyces cerevisiae. Tun NM, et al. Metallomics, 2014 Aug. PMID 24926745
    4. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
    5. Genome-wide analysis to identify pathways affecting telomere-initiated senescence in budding yeast. Chang HY, et al. G3 (Bethesda), 2011 Aug. PMID 22384331, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Gag1p
    NP_013511.4
    • hypothetical protein; null mutant displays elongated buds and a large fraction of budded cells have only one nucleus; Interacts with CKA2 in a potentially competitive mode with the CK2 holoenzyme. Structural prediction analysis reveals a clamp-domain (rear, hinge, front), an unstructured gag region, and a lock-domain

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      932967..933653
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182295.4 → NP_013511.4  TPA: Gag1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013511.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VZ41, Q06070
      UniProtKB/TrEMBL
      A7A1T0, B5VNT9, C8ZE16, G2WJM0, N1P1V5
      Conserved Domains (1) summary
      pfam13259
      Location:144 → 220
      DUF4050; Protein of unknown function (DUF4050)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q06070.2

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