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    atg11 autophagy associated protein kinase regulator Atg11 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541735, updated on 18-Sep-2024

    Summary

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    Official Symbol
    atg11
    Official Full Name
    autophagy associated protein kinase regulator Atg11
    Primary source
    PomBase:SPAC7D4.04
    Locus tag
    SPOM_SPAC7D4.04
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    cvt9; taf1
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    Genomic context

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    See atg11 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (2630448..2633551, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene dolichol-P-Man-dependent alpha(1-3) mannosyltransferase Alg3 Neighboring gene hydrolase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein ahk1 Neighboring gene ncRNA Neighboring gene SH3 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Atg1 kinase in fission yeast is activated by Atg11-mediated dimerization and cis-autophosphorylation. Pan ZQ, et al. Elife, 2020 Sep 10. PMID 32909946, Free PMC Article
    2. Schizosaccharomyces pombe taf1+ is required for nitrogen starvation-induced sexual development and for entering the dormant GO state. Ueno M, et al. Curr Genet, 2001 Jan. PMID 11270572
    3. Atg20- and Atg24-family proteins promote organelle autophagy in fission yeast. Zhao D, et al. J Cell Sci, 2016 Nov 15. PMID 27737912
    4. Visual detection of binary, ternary and quaternary protein interactions in fission yeast using a Pil1 co-tethering assay. Yu ZQ, et al. J Cell Sci, 2021 Oct 1. PMID 34499173
    5. Global analysis of fission yeast mating genes reveals new autophagy factors. Sun LL, et al. PLoS Genet, 2013. PMID 23950735, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular adaptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein serine/threonine kinase activator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in autophagy of mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in macroautophagy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mitophagy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pexophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in piecemeal microautophagy of the nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in reticulophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ribophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of Atg1/ULK1 kinase complex EXP
    Inferred from Experiment
    more info
    		 PubMed 
    part_of Atg1/ULK1 kinase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytoplasm HDA PubMed 
    is_active_in fungal-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in phagophore assembly site IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in phagophore assembly site membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    autophagy associated protein kinase regulator Atg11

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2630448..2633551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019284.3 → NP_593855.1  autophagy associated protein kinase regulator Atg11 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593855.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14261
      Conserved Domains (2) summary
      pfam07106
      Location:550 → 633
      TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
      pfam10377
      Location:797 → 922
      ATG11; Autophagy-related protein 11
    Nucleotide Protein
    Heading Accession and Version

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