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    ecm33 extracellular leucine-rich repeat domain, receptor L domain-like Ecm33 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 3361538, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ecm33
    Official Full Name
    extracellular leucine-rich repeat domain, receptor L domain-like Ecm33
    Primary source
    PomBase:SPAC1705.03c
    Locus tag
    SPOM_SPAC1705.03C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    SPAC23H4.19
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    Genomic context

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    See ecm33 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (1569613..1571589, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene retrotransposable element/transposon Tf2-type Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The cell surface protein gene ecm33+ is a target of the two transcription factors Atf1 and Mbx1 and negatively regulates Pmk1 MAPK cell integrity signaling in fission yeast. Takada H, et al. Mol Biol Cell, 2010 Feb 15. PMID 20032302, Free PMC Article
    2. Mass spectrometric identification of covalently bound cell wall proteins from the fission yeast Schizosaccharomyces pombe. de Groot PW, et al. Yeast, 2007 Apr. PMID 17230583
    3. E3 ubiquitin ligase Pub1 is implicated in endocytosis of a GPI-anchored protein Ecm33 in fission yeast. Fang Y, et al. PLoS One, 2014. PMID 24454826, Free PMC Article
    4. Studies on the roles of clathrin-mediated membrane trafficking and zinc transporter Cis4 in the transport of GPI-anchored proteins in fission yeast. Jaiseng W, et al. PLoS One, 2012. PMID 22848669, Free PMC Article
    5. Repression of ergosterol level during oxidative stress by fission yeast F-box protein Pof14 independently of SCF. Tafforeau L, et al. EMBO J, 2006 Oct 4. PMID 17016471, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cell surface EXP
    Inferred from Experiment
    more info
    		 PubMed 
    is_active_in cell surface IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in external side of plasma membrane NAS
    Non-traceable Author Statement
    more info
    		  
    is_active_in fungal-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    extracellular leucine-rich repeat domain, receptor L domain-like Ecm33

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1569613..1571589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356021.2 → NP_001342953.1  extracellular leucine-rich repeat domain, receptor L domain-like Ecm33 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13887, O13960, Q9P7A7
    Nucleotide Protein
    Heading Accession and Version

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