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    rps13 40S ribosomal protein uS15 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542108, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rps13
    Official Full Name
    40S ribosomal protein uS15
    Primary source
    PomBase:SPAC6F6.07c
    Locus tag
    SPOM_SPAC6F6.07C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rps13 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003424.3 (2745872..2746692, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene cell polarity factor Rax2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene two-component GAP Cdc16 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and characterization of Nrf1p, a novel negative regulator of the Cdc42p GTPase in Schizosaccharomyces pombe. Murray JM, et al. Genetics, 2000 Jan. PMID 10628977, Free PMC Article
    2. A large complex mediated by Moc1, Moc2 and Cpc2 regulates sexual differentiation in fission yeast. Paul SK, et al. FEBS J, 2009 Sep. PMID 19682301
    3. Cotranscriptional recruitment of the nuclear poly(A)-binding protein Pab2 to nascent transcripts and association with translating mRNPs. Lemieux C, et al. Nucleic Acids Res, 2009 Jun. PMID 19336419, Free PMC Article
    4. Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14. Keller C, et al. RNA, 2010 Jun. PMID 20403971, Free PMC Article
    5. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables small ribosomal subunit rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    40S ribosomal protein uS15

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2745872..2746692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019330.3 → NP_593900.1  40S ribosomal protein uS15 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593900.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P28189
      Conserved Domains (3) summary
      PTZ00072
      Location:4 → 151
      PTZ00072; 40S ribosomal protein S13; Provisional
      COG0184
      Location:44 → 147
      RpsO; Ribosomal protein S15P/S13E [Translation, ribosomal structure and biogenesis]
      pfam08069
      Location:4 → 60
      Ribosomal_S13_N; Ribosomal S13/S15 N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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