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    MRPL38 mitochondrial 54S ribosomal protein YmL38/YmL34 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853684, updated on 9-Jun-2024

    Summary

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    Gene symbol
    MRPL38
    Gene description
    mitochondrial 54S ribosomal protein YmL38/YmL34
    Primary source
    FungiDB:YKL170W
    Locus tag
    YKL170W
    See related
    SGD:S000001653; AllianceGenome:SGD:S000001653; VEuPathDB:YKL170W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    uL14m
    Summary
    A structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Located in mitochondrion. Part of mitochondrial large ribosomal subunit. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See MRPL38 in Genome Data Viewer
    Location:
    chromosome: XI
    Exon count:
    1
    Sequence:
    Chromosome: XI; NC_001143.9 (130634..131050)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene Ebp2p Neighboring gene protein kinase NNK1 Neighboring gene putative serine/threonine protein kinase KKQ8 Neighboring gene mitochondrial 54S ribosomal protein MRP49

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001143.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High levels of the mitochondrial large ribosomal subunit protein 40 prevent loss of mitochondrial DNA in null mmf1 Saccharomyces cerevisiae cells. Accardi R, et al. Yeast, 2004 May. PMID 15164357
    2. Extended N-terminal sequencing of proteins of the large ribosomal subunit from yeast mitochondria. Grohmann L, et al. FEBS Lett, 1991 Jun 17. PMID 2060626
    3. Identification and characterization of the genes for mitochondrial ribosomal proteins of Saccharomyces cerevisiae. Kitakawa M, et al. Eur J Biochem, 1997 Apr 15. PMID 9151978
    4. Functional discovery via a compendium of expression profiles. Hughes TR, et al. Cell, 2000 Jul 7. PMID 10929718
    5. The yeast oligopeptide transporter Opt2 is localized to peroxisomes and affects glutathione redox homeostasis. Elbaz-Alon Y, et al. FEMS Yeast Res, 2014 Nov. PMID 25130273

    See all (40) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of mitochondrial large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    mitochondrial 54S ribosomal protein YmL38/YmL34
    NP_012751.1
    • Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001143.9 Reference assembly

      Range
      130634..131050
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179736.1 → NP_012751.1  TPA: mitochondrial 54S ribosomal protein YmL38/YmL34 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012751.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VX30, P35996, P36529
      UniProtKB/TrEMBL
      A0A6A5PTH3, A6ZZF5, B3LQT5, C7GJ38, C8ZC03, G2WHM2, N1P8A0
      Conserved Domains (1) summary
      TIGR01067
      Location:1 → 138
      rplN_bact; ribosomal protein L14, bacterial/organelle
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P35996.1

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