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    atg43 mitophagy receptor Atg43 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541681, updated on 18-Sep-2024

    Summary

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    Official Symbol
    atg43
    Official Full Name
    mitophagy receptor Atg43
    Primary source
    PomBase:SPAC14C4.01c
    Locus tag
    SPOM_SPAC14C4.01C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    SPAC19D5.08c
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    Genomic context

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    See atg43 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (5221803..5226049, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene DNA replication factor C complex subunit Ctf8 Neighboring gene RNA NAD-cap (NAD-forming) hydrolase/RNA pyrophosphohydrolase Din1 Neighboring gene 4-aminobutyrate aminotransferase (GABA transaminase) Neighboring gene ncRNA Neighboring gene Smc5-6 complex SMC P-loop ATPase subunit Smc5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DASH complex subunit Dad3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Atg43 tethers isolation membranes to mitochondria to promote starvation-induced mitophagy in fission yeast. Fukuda T, et al. Elife, 2020 Nov 3. PMID 33138913, Free PMC Article
    2. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
    3. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables mitochondrion autophagosome adaptor activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitophagy EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in mitochondrial outer membrane EXP
    Inferred from Experiment
    more info
    		 PubMed 
    is_active_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    mitophagy receptor Atg43

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      5221803..5226049 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020337.3 → NP_594906.2  mitophagy receptor Atg43 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594906.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13709, Q9Y828
      Conserved Domains (1) summary
      pfam08589
      Location:113 → 194
      DUF1770; Fungal protein of unknown function (DUF1770)
    Nucleotide Protein
    Heading Accession and Version

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