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    rhp7 DNA repair protein [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539094, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rhp7
    Official Full Name
    DNA repair protein
    Primary source
    PomBase:SPCC330.02
    Locus tag
    SPOM_SPCC330.02
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    rad7; SPCC613.14
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    Genomic context

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    See rhp7 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003421.2 (105680..107848)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein meu23 Neighboring gene CLRC ubiquitin ligase complex WD repeat subunit Raf1/Dos1 Neighboring gene ncRNA Neighboring gene ATP-dependent helicase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the rhp7(+) and rhp16(+) genes in Schizosaccharomyces pombe. Lombaerts M, et al. Nucleic Acids Res, 1999 Sep 1. PMID 10446227, Free PMC Article
    2. Atl1 regulates choice between global genome and transcription-coupled repair of O(6)-alkylguanines. Latypov VF, et al. Mol Cell, 2012 Jul 13. PMID 22658721, Free PMC Article
    3. Repair of damaged and mismatched DNA by the XPC homologues Rhp41 and Rhp42 of fission yeast. Marti TM, et al. Genetics, 2003 Jun. PMID 12807767, Free PMC Article
    4. Histone H3 lysine 36 methyltransferase mobilizes NER factors to regulate tolerance against alkylation damage in fission yeast. Lim KK, et al. Nucleic Acids Res, 2018 Jun 1. PMID 29635344, Free PMC Article
    5. Phosphorylation of the RNA-binding protein Zfs1 modulates sexual differentiation in fission yeast. Navarro FJ, et al. J Cell Sci, 2017 Dec 15. PMID 29084823, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nucleotide-excision repair IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in mitotic spindle pole body HDA PubMed 
    part_of nucleotide-excision repair complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    DNA repair protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      105680..107848
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022697.3 → NP_587702.1  DNA repair protein [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_587702.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74999
      Conserved Domains (2) summary
      cd09293
      Location:210 → 452
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:269 → 321
      LRR_AMN1; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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