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    upf2 nonsense-mediated decay protein Upf2 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542147, updated on 18-Sep-2024

    Summary

    Official Symbol
    upf2
    Official Full Name
    nonsense-mediated decay protein Upf2
    Primary source
    PomBase:SPAC19A8.08
    Locus tag
    SPOM_SPAC19A8.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

    See upf2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (2468576..2472061, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene recombination protein Irc6 Neighboring gene SUMO-targeted ubiquitin-protein ligase subunit Rfp1 Neighboring gene ncRNA Neighboring gene transport protein Yos1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein prl65

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    nonsense-mediated decay protein Upf2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2468576..2472061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019213.2NP_593784.1  nonsense-mediated decay protein Upf2 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593784.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13824
      Conserved Domains (4) summary
      smart00543
      Location:447634
      MIF4G; Middle domain of eukaryotic initiation factor 4G (eIF4G)
      pfam02854
      Location:649855
      MIF4G; MIF4G domain
      pfam04050
      Location:9011047
      Upf2; Up-frameshift suppressor 2
      cl02652
      Location:41281
      MIF4G; MIF4G domain