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    L-asparaginase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 3361187, updated on 18-Sep-2024

    Summary

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    Official Full Name
    L-asparaginase
    Primary source
    PomBase:SPBPB8B6.05c
    Locus tag
    SPOM_SPBPB8B6.05C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (54322..55567, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene transcription factor Grt1 Neighboring gene acetamidase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene plasma membrane fluoride export channel Fex2 Neighboring gene ncRNA Neighboring gene enolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables asparaginase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in asparagine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cell surface NAS
    Non-traceable Author Statement
    more info
    		  
    is_active_in cytoplasm HDA PubMed 
    is_active_in periplasmic space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    L-asparaginase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      54322..55567 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020941.3 → NP_001018766.1  L-asparaginase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_001018766.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8TFF8
      Conserved Domains (1) summary
      cd08964
      Location:36 → 350
      L-asparaginase_II; Type II (periplasmic) bacterial L-asparaginase
    Nucleotide Protein
    Heading Accession and Version

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