U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    atp25 ATP synthase complex assembly protein atp25 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542929, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    atp25
    Official Full Name
    ATP synthase complex assembly protein atp25
    Primary source
    PomBase:SPAC31A2.06
    Locus tag
    SPOM_SPAC31A2.06
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See atp25 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (397464..402487)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene adherin Mis4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ATP-dependent RNA helicase Dbp10 Neighboring gene mitochondrial 54S ribosomal protein uL23m Neighboring gene AP-2 adaptor complex subunit Apm4 Neighboring gene ncRNA Neighboring gene Ran GTPase binding protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables poly(A) RNA polymerase activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in mRNA stabilization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mitochondrial mRNA processing IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    is_active_in matrix side of mitochondrial inner membrane IC
    Inferred by Curator
    more info
    		  
    is_active_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    ATP synthase complex assembly protein atp25

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      397464..402487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018319.3 → NP_592918.1  ATP synthase complex assembly protein atp25 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_592918.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09726
      Conserved Domains (2) summary
      pfam02410
      Location:93 → 217
      RsfS; Ribosomal silencing factor during starvation
      pfam13929
      Location:298 → 489
      mRNA_stabil; mRNA stabilization
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials