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    opt3 OPT oligopeptide transporter family protein [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538969, updated on 18-Sep-2024

    Summary

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    Official Symbol
    opt3
    Official Full Name
    OPT oligopeptide transporter family protein
    Primary source
    PomBase:SPCC1840.12
    Locus tag
    SPOM_SPCC1840.12
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    SPCC965.02
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    Genomic context

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    See opt3 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003421.2 (2281612..2284101)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene U6 snRNP-associated protein Lsm8 Neighboring gene ncRNA Neighboring gene exosome subunit Csl4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene V-type ATPase V1 subunit D Neighboring gene i-AAA protease Yme1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables oligopeptide transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in peptide transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    OPT oligopeptide transporter family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      2281612..2284101
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023501.1 → NP_588512.2  OPT oligopeptide transporter family protein [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588512.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q7LL00
      Conserved Domains (1) summary
      TIGR00728
      Location:89 → 753
      OPT_sfam; oligopeptide transporter, OPT superfamily
    Nucleotide Protein
    Heading Accession and Version

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