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    COG6 Golgi transport complex subunit COG6 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855687, updated on 18-Sep-2024

    Summary

    Official Symbol
    COG6
    Official Full Name
    Golgi transport complex subunit COG6
    Primary source
    SGD:S000004986
    Locus tag
    YNL041C
    See related
    AllianceGenome:SGD:S000004986; FungiDB:YNL041C; VEuPathDB:YNL041C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    COD2; SEC37
    Summary
    Involved in cytoplasm to vacuole transport by the Cvt pathway and intra-Golgi vesicle-mediated transport. Part of Golgi transport complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIl. Orthologous to human COG6 (component of oligomeric golgi complex 6). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See COG6 in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (549468..551987, complement)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene uncharacterized protein Neighboring gene Bop3p Neighboring gene uncharacterized protein Neighboring gene putative alanine--tRNA ligase

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in cytoplasm to vacuole targeting by the Cvt pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in intra-Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in intra-Golgi vesicle-mediated transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of Golgi transport complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Golgi transport complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of Golgi transport complex IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Golgi transport complex subunit COG6
    NP_014357.1
    • Component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      549468..551987 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182880.1NP_014357.1  TPA: Golgi transport complex subunit COG6 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014357.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A6ZS37, D6W1D8, P53959
      UniProtKB/TrEMBL
      G2WM62, N1NY18
      Conserved Domains (1) summary
      smart01087
      Location:195834
      COG6; Conserved oligomeric complex COG6