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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001321635.2 → NP_001308564.1 NIPA-like protein 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AI753381, AK024017, AK025015, BC144055, BU677761, DA482369
- Consensus CDS
-
CCDS83310.1
- UniProtKB/Swiss-Prot
- A2RTY8, Q9H841
- Related
- ENSP00000407087.2, ENST00000430223.7
- Conserved Domains (1) summary
-
- cl23754
Location:45 → 332
- EamA; EamA-like transporter family
-
NM_001321636.2 → NP_001308565.1 NIPA-like protein 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon resultiing in a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (c) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AI753381, AK024017, AK025015, BC144055, BU677761, DA482369
- UniProtKB/Swiss-Prot
-
Q9H841
- Conserved Domains (1) summary
-
- cl23754
Location:45 → 315
- EamA; EamA-like transporter family
-
NM_024759.3 → NP_079035.1 NIPA-like protein 2 isoform b
See identical proteins and their annotated locations for NP_079035.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains an additional exon that causes a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (b) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AI753381, AK024017, AK025015, BU677761, DA482369
- Consensus CDS
-
CCDS6278.1
- UniProtKB/Swiss-Prot
-
Q9H841
- Related
- ENSP00000339256.3, ENST00000341166.3
- Conserved Domains (1) summary
-
- cl23754
Location:45 → 332
- EamA; EamA-like transporter family
RNA
-
NR_135745.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI753381, AK024017, AK025015, AL706246, AW082976, BC144055, BU677761, DA482369
-
NR_135746.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) contains two additional internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI753381, AK024017, AK025015, AL706246, AP003439, AW082976, BC144055, BU677761, DA482369
-
NR_135747.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) contains an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AI753381, AK024017, AK025015, BC144055, BP346328, BU677761, DA184376, DA482369, DC402113