U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Ccr4 C-C motif chemokine receptor 4 [ Mus musculus (house mouse) ]

    Gene ID: 12773, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Ccr4provided by MGI
    Official Full Name
    C-C motif chemokine receptor 4provided by MGI
    Primary source
    MGI:MGI:107824
    See related
    Ensembl:ENSMUSG00000047898 AllianceGenome:MGI:107824
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    LESTR; Sdf1r; CHEMR1; Cmkbr4; C-C CKR-4
    Summary
    Enables C-C chemokine receptor activity. Acts upstream of or within several processes, including homeostasis of number of cells; interneuron migration; and tolerance induction. Located in external side of plasma membrane. Is expressed in several structures, including central nervous system; gut; limb; liver and biliary system; and reproductive system. Orthologous to human CCR4 (C-C motif chemokine receptor 4). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in thymus adult (RPKM 10.4), testis adult (RPKM 1.5) and 2 other tissues See more
    Orthologs
    human all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Ccr4 in Genome Data Viewer
    Location:
    9 F3; 9 64.49 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (114319384..114334544, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (114490316..114505476, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5109 Neighboring gene STARR-positive B cell enhancer mm9_chr9:114327339-114327639 Neighboring gene transmembrane protein with metallophosphoesterase domain Neighboring gene galactosidase, beta 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:114345054-114345237 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:114352487-114352773 Neighboring gene predicted gene, 30254 Neighboring gene STARR-seq mESC enhancer starr_25350 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:114419096-114419279 Neighboring gene tripartite motif-containing 71 Neighboring gene STARR-seq mESC enhancer starr_25364 Neighboring gene STARR-seq mESC enhancer starr_25369 Neighboring gene STARR-seq mESC enhancer starr_25371 Neighboring gene STARR-seq mESC enhancer starr_25375 Neighboring gene predicted gene, 53512 Neighboring gene CCR4-NOT transcription complex, subunit 10

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cutting Edge: Chemokine receptor CCR4 is necessary for antigen-driven cutaneous accumulation of CD4 T cells under physiological conditions. Campbell JJ, et al. J Immunol, 2007 Mar 15. PMID 17339428, Free PMC Article
    2. Rapalog combined with CCR4 antagonist improves anticancer vaccines efficacy. Beziaud L, et al. Int J Cancer, 2018 Dec 1. PMID 30183073
    3. Airway hyperresponsiveness, but not airway remodeling, is attenuated during chronic pulmonary allergic responses to Aspergillus in CCR4-/- mice. Schuh JM, et al. FASEB J, 2002 Aug. PMID 12154006
    4. CCR4 Is Critically Involved in Skin Allergic Inflammation of BALB/c Mice. Matsuo K, et al. J Invest Dermatol, 2018 Aug. PMID 29510192
    5. CCR4-bearing T cells participate in autoimmune diabetes. Kim SH, et al. J Clin Invest, 2002 Dec. PMID 12464673, Free PMC Article

    See all (117) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Ischemic stroke outcome after promoting CD4+CD25+ Treg cell migration through CCR4 overexpression in a tMCAO animal model.
      Title: Ischemic stroke outcome after promoting CD4+CD25+ Treg cell migration through CCR4 overexpression in a tMCAO animal model.
    2. CCR4 and CCR7 differentially regulate thymocyte localization with distinct outcomes for central tolerance.
      Title: CCR4 and CCR7 differentially regulate thymocyte localization with distinct outcomes for central tolerance.
    3. CCR4 plays a pivotal role in Th17 cell recruitment and expansion in a mouse model of rheumatoid arthritis.
      Title: CCR4 plays a pivotal role in Th17 cell recruitment and expansion in a mouse model of rheumatoid arthritis.
    4. Skin-resident dendritic cells mediate postoperative pain via CCR4 on sensory neurons.
      Title: Skin-resident dendritic cells mediate postoperative pain via CCR4 on sensory neurons.
    5. CCR4 Involvement in the Expansion of T Helper Type 17 Cells in a Mouse Model of Psoriasis.
      Title: CCR4 Involvement in the Expansion of T Helper Type 17 Cells in a Mouse Model of Psoriasis.
    6. Recombinant CCL17 Enhances Hematoma Resolution and Activation of CCR4/ERK/Nrf2/CD163 Signaling Pathway After Intracerebral Hemorrhage in Mice.
      Title: Recombinant CCL17 Enhances Hematoma Resolution and Activation of CCR4/ERK/Nrf2/CD163 Signaling Pathway After Intracerebral Hemorrhage in Mice.
    7. Tumors establish resistance to immunotherapy by regulating Treg recruitment via CCR4.
      Title: Tumors establish resistance to immunotherapy by regulating T(reg) recruitment via CCR4.
    8. Fluid flow-induced left-right asymmetric decay of Dand5 mRNA in the mouse embryo requires a Bicc1-Ccr4 RNA degradation complex.
      Title: Fluid flow-induced left-right asymmetric decay of Dand5 mRNA in the mouse embryo requires a Bicc1-Ccr4 RNA degradation complex.
    9. Blockade of CCR4 Diminishes Hypersensitivity and Enhances Opioid Analgesia - Evidence from a Mouse Model of Diabetic Neuropathy.
      Title: Blockade of CCR4 Diminishes Hypersensitivity and Enhances Opioid Analgesia - Evidence from a Mouse Model of Diabetic Neuropathy.
    10. Dendritic cells and regulatory T cells expressing CCR4 provide resistance to coxsackievirus B5-induced pancreatitis.
      Title: Dendritic cells and regulatory T cells expressing CCR4 provide resistance to coxsackievirus B5-induced pancreatitis.
    Submit: New GeneRIF Correction See all GeneRIFs (60)

    Variation

    Go to the top of the page Help

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC151418

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables C-C chemokine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables C-C chemokine receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables C-C chemokine receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium-mediated signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cell chemotaxis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in chemokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within chemotaxis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within homeostasis of number of cells IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within inflammatory response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within interneuron migration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within neuron migration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in positive regulation of positive chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in positive regulation of positive chemotaxis ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in response to bacterium IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within tolerance induction IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in external side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    C-C chemokine receptor type 4
    Names
    chemokine (C-C motif) receptor 4
    chemokine (C-C) receptor 4
    fusin
    leukocyte-expressed seven-transmembrane-domain receptor
    NP_034046.2
    XP_006511995.1
    XP_006511996.1
    XP_006511997.1
    XP_011241235.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009916.2 → NP_034046.2  C-C chemokine receptor type 4

      See identical proteins and their annotated locations for NP_034046.2

      Status: VALIDATED

      Source sequence(s)
      AC164109, BC119171
      Consensus CDS
      CCDS23594.1
      UniProtKB/Swiss-Prot
      P51680, Q14A03
      Related
      ENSMUSP00000062677.4, ENSMUST00000054414.5
      Conserved Domains (1) summary
      cd14984
      Location:40 → 315
      7tmA_Chemokine_R; classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      114319384..114334544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006511934.4 → XP_006511997.1  C-C chemokine receptor type 4 isoform X2

      See identical proteins and their annotated locations for XP_006511997.1

      UniProtKB/Swiss-Prot
      P51680, Q14A03
      Conserved Domains (1) summary
      cd14984
      Location:40 → 315
      7tmA_Chemokine_R; classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_006511932.4 → XP_006511995.1  C-C chemokine receptor type 4 isoform X1

      Conserved Domains (1) summary
      cd14984
      Location:147 → 422
      7tmA_Chemokine_R; classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

    3. XM_011242933.3 → XP_011241235.1  C-C chemokine receptor type 4 isoform X2

      See identical proteins and their annotated locations for XP_011241235.1

      UniProtKB/Swiss-Prot
      P51680, Q14A03
      Conserved Domains (1) summary
      cd14984
      Location:40 → 315
      7tmA_Chemokine_R; classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

    4. XM_006511933.2 → XP_006511996.1  C-C chemokine receptor type 4 isoform X2

      See identical proteins and their annotated locations for XP_006511996.1

      UniProtKB/Swiss-Prot
      P51680, Q14A03
      Related
      ENSMUSP00000150002.2, ENSMUST00000215425.2
      Conserved Domains (1) summary
      cd14984
      Location:40 → 315
      7tmA_Chemokine_R; classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P51680.2 GenPept UniProtKB/Swiss-Prot:P51680

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous