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    • Showing Current items.

    Lce1h late cornified envelope 1H [ Mus musculus (house mouse) ]

    Gene ID: 67718, updated on 2-Nov-2024

    Summary

    Official Symbol
    Lce1hprovided by MGI
    Official Full Name
    late cornified envelope 1Hprovided by MGI
    Primary source
    MGI:MGI:1914968
    See related
    Ensembl:ENSMUSG00000049593 AllianceGenome:MGI:1914968
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sprrl9; 2310066F03Rik
    Summary
    Is expressed in skin and tongue. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward stomach adult (RPKM 53.3) See more
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    Genomic context

    See Lce1h in Genome Data Viewer
    Location:
    3 F1; 3 40.14 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92670522..92672372, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (92763215..92765065, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene late cornified envelope 1F Neighboring gene late cornified envelope 1G Neighboring gene late cornified envelope 1I Neighboring gene late cornified envelope 1J

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    late cornified envelope 1H
    Names
    small proline rich-like 9

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026335.2NP_080611.1  late cornified envelope 1H

      See identical proteins and their annotated locations for NP_080611.1

      Status: PROVISIONAL

      Source sequence(s)
      AK010064
      Consensus CDS
      CCDS17570.1
      UniProtKB/TrEMBL
      Q9D6R3
      Related
      ENSMUSP00000058647.5, ENSMUST00000051521.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      92670522..92672372 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)