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    LOC105369705 uncharacterized LOC105369705 [ Homo sapiens (human) ]

    Gene ID: 105369705, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105369705
    Gene description
    uncharacterized LOC105369705
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105369705 in Genome Data Viewer
    Location:
    12p12.1-p11.23
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (26252872..26310455)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (26125405..26183001)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902901 Neighboring gene Ras association domain family member 8 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:26200376-26200975 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4299 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4300 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4301 Neighboring gene basic helix-loop-helix family member e41 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26866 Neighboring gene sarcospan Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:26379181-26379816 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:26398995-26400194 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6118 Neighboring gene ITPR2 and SSPN antisense RNA 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26902 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6119 Neighboring gene uncharacterized LOC105369704 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6120 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6121 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6122 Neighboring gene uncharacterized LOC107984482 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6123 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr12:26512284-26513483 Neighboring gene RNA, 5S ribosomal pseudogene 354 Neighboring gene inositol 1,4,5-trisphosphate receptor type 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      26252872..26310455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007063249.1 RNA Sequence

    2. XR_931451.3 RNA Sequence

    3. XR_931452.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      26125405..26183001
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007083362.1 RNA Sequence

    2. XR_007083360.1 RNA Sequence

    3. XR_007083361.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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