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    CG4950 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39783, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG4950provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036587
    Locus tag
    Dmel_CG4950
    See related
    AllianceGenome:FB:FBgn0036587
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CT15890; Dmel\CG4950
    Summary
    Is expressed in adult head. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG4950 in Genome Data Viewer
    Location:
    72D10-72D10; 3-44 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16265797..16268156, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16258897..16261256, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The MAPKKK Mekk1 regulates the expression of Turandot stress genes in response to septic injury in Drosophila. Brun S, et al. Genes Cells, 2006 Apr. PMID 16611243
    2. RNA degradation is required for the germ-cell to maternal transition in Drosophila. Blatt P, et al. Curr Biol, 2021 Jul 26. PMID 33989522, Free PMC Article
    3. The transcriptional diversity of 25 Drosophila cell lines. Cherbas L, et al. Genome Res, 2011 Feb. PMID 21177962, Free PMC Article
    4. Conserved chromosomal clustering of genes governed by chromatin regulators in Drosophila. Blanco E, et al. Genome Biol, 2008. PMID 18783608, Free PMC Article
    5. Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila. Cho B, et al. Nat Commun, 2020 Sep 8. PMID 32900993, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG4950-PB
    CG4950-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16265797..16268156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275005.1 → NP_001261934.1  uncharacterized protein Dmel_CG4950, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261934.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D0IQE5, Q9VV09
      Conserved Domains (3) summary
      cd00116
      Location:207 → 432
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:96 → 119
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:118 → 178
      LRR_8; Leucine rich repeat

    2. NM_140598.3 → NP_648855.2  uncharacterized protein Dmel_CG4950, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648855.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      D0IQE5, Q9VV09
      Conserved Domains (3) summary
      cd00116
      Location:207 → 432
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:96 → 119
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:118 → 178
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VV09 Q9VV09

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