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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001199942.2 → NP_001186871.1 protein dopey-1 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region and has an alternate in-frame exon in the 3' coding region compared to variant 1. The resulting protein (isoform b) is longer compared to isoform a.
- Source sequence(s)
-
AL121716, AL139333
- Consensus CDS
-
CCDS64467.1
- UniProtKB/TrEMBL
- B2RWN9, F6U2K4, Q5TA12
- Related
- ENSP00000237163.6, ENST00000237163.9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 295
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2082 → 2318
- Dopey_N; Dopey, N-terminal
-
NM_001385856.1 → NP_001372785.1 protein dopey-1 isoform c
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 297
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2081 → 2317
- Dopey_N; Dopey, N-terminal
-
NM_001385857.1 → NP_001372786.1 protein dopey-1 isoform c
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 297
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2081 → 2317
- Dopey_N; Dopey, N-terminal
-
NM_001385858.1 → NP_001372787.1 protein dopey-1 isoform e
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (1) summary
-
- cl04407
Location:1 → 146
- Dopey_N; Dopey, N-terminal
-
NM_001385859.1 → NP_001372788.1 protein dopey-1 isoform f
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (1) summary
-
- cl04407
Location:1816 → 1976
- Dopey_N; Dopey, N-terminal
-
NM_001385860.1 → NP_001372789.1 protein dopey-1 isoform c
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 297
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2081 → 2317
- Dopey_N; Dopey, N-terminal
-
NM_001385861.1 → NP_001372790.1 protein dopey-1 isoform c
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 297
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2081 → 2317
- Dopey_N; Dopey, N-terminal
-
NM_001385863.1 → NP_001372792.1 protein dopey-1 isoform b
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- Consensus CDS
-
CCDS64467.1
- UniProtKB/TrEMBL
- B2RWN9, F6U2K4, Q5TA12
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 295
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2082 → 2318
- Dopey_N; Dopey, N-terminal
-
NM_001385864.1 → NP_001372793.1 protein dopey-1 isoform g
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- Conserved Domains (1) summary
-
- cl04407
Location:1579 → 1815
- Dopey_N; Dopey, N-terminal
-
NM_001385865.1 → NP_001372794.1 protein dopey-1 isoform d
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 295
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2082 → 2318
- Dopey_N; Dopey, N-terminal
-
NM_015018.4 → NP_055833.2 protein dopey-1 isoform a
See identical proteins and their annotated locations for NP_055833.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the shorter transcript and encodes the shorter protein (isoform a).
- Source sequence(s)
-
AL121716, AL139333
- Consensus CDS
-
CCDS4996.1
- UniProtKB/Swiss-Prot
- Q5JWR5, Q86XV1, Q9H5J5, Q9NSL4, Q9UPN5, Q9Y414
- UniProtKB/TrEMBL
-
B2RWN9
- Related
- ENSP00000195654.3, ENST00000349129.7
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 299
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2091 → 2327
- Dopey_N; Dopey, N-terminal
RNA
-
NR_169790.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
-
NR_169791.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL121716, AL139333
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
83067671..83171350
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017010559.2 → XP_016866048.1 protein dopey-1 isoform X1
- UniProtKB/TrEMBL
-
B2RWN9
-
XM_017010564.2 → XP_016866053.1 protein dopey-1 isoform X5
- UniProtKB/Swiss-Prot
- Q5JWR5, Q86XV1, Q9H5J5, Q9NSL4, Q9UPN5, Q9Y414
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 299
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2091 → 2327
- Dopey_N; Dopey, N-terminal
-
XM_017010572.2 → XP_016866061.1 protein dopey-1 isoform X11
- UniProtKB/TrEMBL
-
B2RWN9
-
XM_047418447.1 → XP_047274403.1 protein dopey-1 isoform X15
-
XM_047418448.1 → XP_047274404.1 protein dopey-1 isoform X15
-
XM_017010571.2 → XP_016866060.1 protein dopey-1 isoform X9
- UniProtKB/TrEMBL
-
B2RWN9
-
XM_047418442.1 → XP_047274398.1 protein dopey-1 isoform X12
-
XM_047418443.1 → XP_047274399.1 protein dopey-1 isoform X12
-
XM_047418451.1 → XP_047274407.1 protein dopey-1 isoform X18
-
XM_011535619.3 → XP_011533921.1 protein dopey-1 isoform X3
See identical proteins and their annotated locations for XP_011533921.1
- UniProtKB/TrEMBL
-
B2RWN9
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 299
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2081 → 2317
- Dopey_N; Dopey, N-terminal
-
XM_047418434.1 → XP_047274390.1 protein dopey-1 isoform X7
-
XM_017010561.2 → XP_016866050.1 protein dopey-1 isoform X2
- UniProtKB/TrEMBL
- B2RWN9, F6U2K4, Q5TA12
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 295
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2082 → 2318
- Dopey_N; Dopey, N-terminal
-
XM_017010570.2 → XP_016866059.1 protein dopey-1 isoform X8
- UniProtKB/TrEMBL
-
B2RWN9
-
XM_047418440.1 → XP_047274396.1 protein dopey-1 isoform X10
-
XM_047418445.1 → XP_047274401.1 protein dopey-1 isoform X13
-
XM_047418450.1 → XP_047274406.1 protein dopey-1 isoform X17
-
XM_017010560.3 → XP_016866049.1 protein dopey-1 isoform X1
- UniProtKB/TrEMBL
-
B2RWN9
-
XM_047418430.1 → XP_047274386.1 protein dopey-1 isoform X3
-
XM_047418435.1 → XP_047274391.1 protein dopey-1 isoform X7
-
XM_047418449.1 → XP_047274405.1 protein dopey-1 isoform X16
-
XM_047418446.1 → XP_047274402.1 protein dopey-1 isoform X14
-
XM_017010562.3 → XP_016866051.1 protein dopey-1 isoform X2
- UniProtKB/TrEMBL
- B2RWN9, F6U2K4, Q5TA12
- Conserved Domains (2) summary
-
- pfam04118
Location:13 → 295
- Dopey_N; Dopey, N-terminal
- cl04407
Location:2082 → 2318
- Dopey_N; Dopey, N-terminal
-
XM_047418433.1 → XP_047274389.1 protein dopey-1 isoform X6
-
XM_047418432.1 → XP_047274388.1 protein dopey-1 isoform X4
-
XM_047418438.1 → XP_047274394.1 protein dopey-1 isoform X8
-
XM_047418439.1 → XP_047274395.1 protein dopey-1 isoform X10
-
XM_047418444.1 → XP_047274400.1 protein dopey-1 isoform X13
-
XM_047418452.1 → XP_047274408.1 protein dopey-1 isoform X19
-
XM_047418453.1 → XP_047274409.1 protein dopey-1 isoform X20
-
XM_047418455.1 → XP_047274411.1 protein dopey-1 isoform X24
-
XM_017010573.1 → XP_016866062.1 protein dopey-1 isoform X21
- UniProtKB/TrEMBL
-
B2RWN9
-
XM_017010574.1 → XP_016866063.1 protein dopey-1 isoform X22
- UniProtKB/TrEMBL
-
B2RWN9
-
XM_047418454.1 → XP_047274410.1 protein dopey-1 isoform X23
-
XM_047418428.1 → XP_047274384.1 protein dopey-1 isoform X1
-
XM_047418431.1 → XP_047274387.1 protein dopey-1 isoform X3
-
XM_047418436.1 → XP_047274392.1 protein dopey-1 isoform X7
-
XM_047418441.1 → XP_047274397.1 protein dopey-1 isoform X10
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
84290676..84394587
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054354754.1 → XP_054210729.1 protein dopey-1 isoform X1
-
XM_054354763.1 → XP_054210738.1 protein dopey-1 isoform X5
-
XM_054354774.1 → XP_054210749.1 protein dopey-1 isoform X11
-
XM_054354780.1 → XP_054210755.1 protein dopey-1 isoform X15
-
XM_054354781.1 → XP_054210756.1 protein dopey-1 isoform X15
-
XM_054354770.1 → XP_054210745.1 protein dopey-1 isoform X9
-
XM_054354775.1 → XP_054210750.1 protein dopey-1 isoform X12
-
XM_054354776.1 → XP_054210751.1 protein dopey-1 isoform X12
-
XM_054354784.1 → XP_054210759.1 protein dopey-1 isoform X18
-
XM_054354759.1 → XP_054210734.1 protein dopey-1 isoform X3
-
XM_054354765.1 → XP_054210740.1 protein dopey-1 isoform X7
-
XM_054354757.1 → XP_054210732.1 protein dopey-1 isoform X2
-
XM_054354768.1 → XP_054210743.1 protein dopey-1 isoform X8
-
XM_054354772.1 → XP_054210747.1 protein dopey-1 isoform X10
-
XM_054354778.1 → XP_054210753.1 protein dopey-1 isoform X13
-
XM_054354783.1 → XP_054210758.1 protein dopey-1 isoform X17
-
XM_054354755.1 → XP_054210730.1 protein dopey-1 isoform X1
-
XM_054354760.1 → XP_054210735.1 protein dopey-1 isoform X3
-
XM_054354766.1 → XP_054210741.1 protein dopey-1 isoform X7
-
XM_054354782.1 → XP_054210757.1 protein dopey-1 isoform X16
-
XM_054354779.1 → XP_054210754.1 protein dopey-1 isoform X14
-
XM_054354758.1 → XP_054210733.1 protein dopey-1 isoform X2
-
XM_054354764.1 → XP_054210739.1 protein dopey-1 isoform X6
-
XM_054354762.1 → XP_054210737.1 protein dopey-1 isoform X4
-
XM_054354769.1 → XP_054210744.1 protein dopey-1 isoform X8
-
XM_054354771.1 → XP_054210746.1 protein dopey-1 isoform X10
-
XM_054354777.1 → XP_054210752.1 protein dopey-1 isoform X13
-
XM_054354785.1 → XP_054210760.1 protein dopey-1 isoform X19
-
XM_054354786.1 → XP_054210761.1 protein dopey-1 isoform X20
-
XM_054354790.1 → XP_054210765.1 protein dopey-1 isoform X24
-
XM_054354787.1 → XP_054210762.1 protein dopey-1 isoform X21
-
XM_054354788.1 → XP_054210763.1 protein dopey-1 isoform X22
-
XM_054354789.1 → XP_054210764.1 protein dopey-1 isoform X23
-
XM_054354756.1 → XP_054210731.1 protein dopey-1 isoform X1
-
XM_054354761.1 → XP_054210736.1 protein dopey-1 isoform X3
-
XM_054354767.1 → XP_054210742.1 protein dopey-1 isoform X7
-
XM_054354773.1 → XP_054210748.1 protein dopey-1 isoform X10