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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_052622.1 RefSeqGene
- Range
-
5054..39970
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001042403.3 → NP_001035862.1 ubiquitin carboxyl-terminal hydrolase 44
See identical proteins and their annotated locations for NP_001035862.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) encodes the same protein as variants 1, 3, 4, and 6.
- Source sequence(s)
-
AC018475, AK027434, AK315697, BM023146, DA092275, DB462518
- Consensus CDS
-
CCDS9053.1
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
- Related
- ENSP00000376806.2, ENST00000393091.6
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 676
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 675
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
NM_001278393.2 → NP_001265322.1 ubiquitin carboxyl-terminal hydrolase 44
See identical proteins and their annotated locations for NP_001265322.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) encodes the same protein as variants 1, 2, 5, and 6.
- Source sequence(s)
-
AC018475, AK027434, AK315697, BM023146, DA092275, DB454726
- Consensus CDS
-
CCDS9053.1
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
- Related
- ENSP00000442629.2, ENST00000537435.2
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 676
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 675
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
NM_001347936.2 → NP_001334865.1 ubiquitin carboxyl-terminal hydrolase 44
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) encodes the same protein as variants 1, 2, 3, and 6.
- Source sequence(s)
-
AC018475
- Consensus CDS
-
CCDS9053.1
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
-
NM_001347937.2 → NP_001334866.1 ubiquitin carboxyl-terminal hydrolase 44
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) encodes the same protein as variants 1, 2, 3, and 5.
- Source sequence(s)
-
AC018475
- Consensus CDS
-
CCDS9053.1
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
-
NM_032147.5 → NP_115523.2 ubiquitin carboxyl-terminal hydrolase 44
See identical proteins and their annotated locations for NP_115523.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the same protein as variants 2, 3, 5, and 6.
- Source sequence(s)
-
AC018475, AK315697, BM023146, DA092275, DB443014, DB456039
- Consensus CDS
-
CCDS9053.1
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
- Related
- ENSP00000258499.3, ENST00000258499.8
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 676
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 675
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
RNA
-
NR_125360.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) is represented as non-coding because the use of the 5'-most supported translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC018475
-
NR_144944.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC018475
-
NR_144945.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC018475
-
NR_144946.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC018475
-
NR_144947.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC018475
-
NR_144948.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC018475
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
95516560..95551681 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047429645.1 → XP_047285601.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
-
XM_011538803.1 → XP_011537105.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_011537105.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_005269172.2 → XP_005269229.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_005269229.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_047429643.1 → XP_047285599.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
-
XM_011538800.3 → XP_011537102.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_011537102.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_047429644.1 → XP_047285600.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
-
XM_011538805.3 → XP_011537107.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_011537107.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_005269174.2 → XP_005269231.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_005269231.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_047429642.1 → XP_047285598.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
- UniProtKB/Swiss-Prot
- B2RDW3, Q9H0E7
-
XM_011538802.2 → XP_011537104.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_011537104.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_011538801.2 → XP_011537103.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_011537103.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_011538804.3 → XP_011537106.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_011537106.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_005269173.2 → XP_005269230.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
See identical proteins and their annotated locations for XP_005269230.1
- Conserved Domains (3) summary
-
- cl02553
Location:274 → 707
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:272 → 706
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_047429646.1 → XP_047285602.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X4
- UniProtKB/TrEMBL
-
F8VRI7
- Related
- ENSP00000448670.1, ENST00000552440.5
-
XM_047429647.1 → XP_047285603.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X4
- UniProtKB/TrEMBL
-
F8VRI7
-
XM_011538806.3 → XP_011537108.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X3
- Conserved Domains (3) summary
-
- cd02257
Location:421 → 496
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- cl02553
Location:274 → 438
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam02148
Location:29 → 90
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
RNA
-
XR_944757.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
95497607..95532730 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054373417.1 → XP_054229392.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
-
XM_054373413.1 → XP_054229388.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373406.1 → XP_054229381.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373418.1 → XP_054229393.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
-
XM_054373410.1 → XP_054229385.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373416.1 → XP_054229391.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
-
XM_054373414.1 → XP_054229389.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373408.1 → XP_054229383.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373415.1 → XP_054229390.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X2
-
XM_054373409.1 → XP_054229384.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373411.1 → XP_054229386.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373407.1 → XP_054229382.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373412.1 → XP_054229387.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X1
-
XM_054373420.1 → XP_054229395.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X4
-
XM_054373421.1 → XP_054229396.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X4
-
XM_054373419.1 → XP_054229394.1 ubiquitin carboxyl-terminal hydrolase 44 isoform X3
RNA
-
XR_008488692.1 RNA Sequence