SDHAP1 SDHA pseudogene 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: SDHAP1provided by HGNC
Official Full Name: SDHA pseudogene 1provided by HGNC
Primary source: HGNC:HGNC:32455
See related: Ensembl:ENSG00000290763 AllianceGenome:HGNC:32455
Gene type: pseudo
RefSeq status: PROVISIONAL
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: SDHAL1; SDHALP1
Annotation information: Note: After Build36.1, HUGO Gene Nomenclature Committee (HGNC) and NCBI noted that the annotation of SDHAL1 and SDHAL2 was incorrect. SDHAL1 is the form telomeric to SDHAL2. At that time the name of GeneID 255812 was changed to SDHAL1. [11 Apr 2007]
Expression: Ubiquitous expression in endometrium (RPKM 12.4), testis (RPKM 11.3) and 25 other tissues See more
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Genomic context

Location:: 3q29

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	3	NC_000003.12 (195959921..195990279, complement)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	3	NC_060927.1 (198679298..198709381, complement)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	3	NC_000003.11 (195686792..195717150, complement)

Chromosome 3 - NC_000003.12 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

LncRNA SDHAP1 confers paclitaxel resistance of ovarian cancer by regulating EIF4G2 expression via miR-4465.
Title: LncRNA SDHAP1 confers paclitaxel resistance of ovarian cancer by regulating EIF4G2 expression via miR-4465.

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

RH12738 (e-PCR)
- UniSTS:4632

G33146 (e-PCR)
- UniSTS:20269

RH76040 (e-PCR)
- UniSTS:92051

RH63773 (e-PCR)
- UniSTS:84722

Other Names

succinate dehydrogenase complex flavoprotein subunit A pseudogene 1
succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
succinate dehydrogenase complex, subunit A, flavoprotein-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.