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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286771.3 → NP_001273700.1 ankyrin repeat domain-containing protein 17 isoform c
See identical proteins and their annotated locations for NP_001273700.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in its 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate start codon, compared to variant a. The encoded isoform (c) has a distinct N-terminus and is shorter than isoform a.
- Source sequence(s)
-
AC053527, AC095053, AC105757
- Consensus CDS
-
CCDS68721.1
- UniProtKB/TrEMBL
-
H0YM23
- Related
- ENSP00000427151.2, ENST00000509867.6
- Conserved Domains (9) summary
-
- PHA03095
Location:984 → 1290
- PHA03095; ankyrin-like protein; Provisional
- PHA03247
Location:1912 → 2344
- PHA03247; large tegument protein UL36; Provisional
- sd00045
Location:322 → 351
- ANK; ANK repeat [structural motif]
- pfam13637
Location:1207 → 1260
- Ank_4; Ankyrin repeats (many copies)
- pfam03154
Location:2011 → 2221
- Atrophin-1; Atrophin-1 family
- pfam03938
Location:681 → 780
- OmpH; Outer membrane protein (OmpH-like)
- pfam12796
Location:455 → 546
- Ank_2; Ankyrin repeats (3 copies)
- cd22502
Location:1613 → 1683
- KH-I_ANKRD17; type I K homology (KH) RNA-binding domain found in ankyrin repeat domain-containing protein 17 (ANKRD17) and similar proteins
- cl39094
Location:962 → 1000
- Ank_2; Ankyrin repeats (3 copies)
-
NM_015574.2 → NP_056389.1 ankyrin repeat domain-containing protein 17 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the central coding region codon compared to variant a. The encoded isoform (d) is one amino acid shorter than isoform a.
- Source sequence(s)
-
AC053527, AC095053, AC105757
- UniProtKB/TrEMBL
-
H0YM23
- Related
- ENSP00000453434.1, ENST00000558247.5
- Conserved Domains (10) summary
-
- TIGR02926
Location:805 → 881
- AhaH; ATP synthase archaeal, H subunit
- smart00248
Location:1081 → 1109
- ANK; ankyrin repeats
- COG0195
Location:1719 → 1766
- NusA; Transcription antitermination factor NusA, contains S1 and KH domains [Transcription]
- COG0666
Location:1045 → 1271
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00105
Location:1726 → 1788
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd00204
Location:396 → 520
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam03938
Location:794 → 893
- OmpH; Outer membrane protein (OmpH-like)
- pfam12796
Location:305 → 394
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:403 → 454
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:435 → 464
- ANK; ANK repeat [structural motif]
-
NM_032217.5 → NP_115593.3 ankyrin repeat domain-containing protein 17 isoform a
See identical proteins and their annotated locations for NP_115593.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AC053527, AC095053, AC105757
- Consensus CDS
-
CCDS34004.1
- UniProtKB/Swiss-Prot
- E7EUV3, G5E964, O75179, Q6PJ85, Q6PK85, Q6PKA2, Q86XI3, Q8NDR5, Q96I86, Q9H288, Q9H6J9
- UniProtKB/TrEMBL
-
H0YM23
- Related
- ENSP00000351416.4, ENST00000358602.9
- Conserved Domains (10) summary
-
- TIGR02926
Location:805 → 881
- AhaH; ATP synthase archaeal, H subunit
- smart00248
Location:1082 → 1110
- ANK; ankyrin repeats
- COG0195
Location:1720 → 1767
- NusA; Transcription antitermination factor NusA, contains S1 and KH domains [Transcription]
- COG0666
Location:1046 → 1272
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00105
Location:1727 → 1789
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd00204
Location:396 → 520
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam03938
Location:794 → 893
- OmpH; Outer membrane protein (OmpH-like)
- pfam12796
Location:305 → 394
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:403 → 454
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:435 → 464
- ANK; ANK repeat [structural motif]
-
NM_198889.3 → NP_942592.1 ankyrin repeat domain-containing protein 17 isoform b
See identical proteins and their annotated locations for NP_942592.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the central coding region compared to variant 1. The resulting isoform (b) has the same N- and C-termini but is shorter than isoform a.
- Source sequence(s)
-
AC053527, AC095053, AC105757
- Consensus CDS
-
CCDS34003.1
- UniProtKB/TrEMBL
-
H0YM23
- Related
- ENSP00000332265.6, ENST00000330838.10
- Conserved Domains (7) summary
-
- COG0195
Location:1469 → 1516
- NusA; Transcription antitermination factor NusA, contains S1 and KH domains [Transcription]
- COG0666
Location:795 → 1021
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00105
Location:1476 → 1538
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd00204
Location:396 → 520
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:305 → 394
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:403 → 454
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:435 → 464
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
73073376..73258798 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005265671.5 → XP_005265728.1 ankyrin repeat domain-containing protein 17 isoform X6
- UniProtKB/TrEMBL
-
H0YM23
- Conserved Domains (7) summary
-
- COG0195
Location:1468 → 1515
- NusA; Transcription antitermination factor NusA, contains S1 and KH domains [Transcription]
- COG0666
Location:794 → 1020
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00105
Location:1475 → 1537
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd00204
Location:396 → 520
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:305 → 394
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:403 → 454
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:435 → 464
- ANK; ANK repeat [structural motif]
-
XM_047450038.1 → XP_047305994.1 ankyrin repeat domain-containing protein 17 isoform X1
-
XM_047450039.1 → XP_047305995.1 ankyrin repeat domain-containing protein 17 isoform X3
-
XM_017008013.2 → XP_016863502.1 ankyrin repeat domain-containing protein 17 isoform X8
- UniProtKB/TrEMBL
-
H0YM23
-
XM_017008012.2 → XP_016863501.1 ankyrin repeat domain-containing protein 17 isoform X7
- UniProtKB/TrEMBL
-
H0YM23
-
XM_017008011.2 → XP_016863500.1 ankyrin repeat domain-containing protein 17 isoform X2
- UniProtKB/TrEMBL
-
H0YM23
-
XM_047450041.1 → XP_047305997.1 ankyrin repeat domain-containing protein 17 isoform X5
-
XM_047450040.1 → XP_047305996.1 ankyrin repeat domain-containing protein 17 isoform X4
-
XM_047450046.1 → XP_047306002.1 ankyrin repeat domain-containing protein 17 isoform X17
-
XM_047450045.1 → XP_047306001.1 ankyrin repeat domain-containing protein 17 isoform X16
-
XM_047450042.1 → XP_047305998.1 ankyrin repeat domain-containing protein 17 isoform X10
-
XM_005265672.5 → XP_005265729.1 ankyrin repeat domain-containing protein 17 isoform X9
- UniProtKB/TrEMBL
-
B4DTP3
- Conserved Domains (7) summary
-
- smart00248
Location:1082 → 1110
- ANK; ankyrin repeats
- COG0666
Location:1046 → 1272
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00204
Location:396 → 520
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:305 → 394
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:403 → 454
- Ank_4; Ankyrin repeats (many copies)
- pfam14942
Location:805 → 882
- Muted; Organelle biogenesis, Muted-like protein
- sd00045
Location:435 → 464
- ANK; ANK repeat [structural motif]
-
XM_047450043.1 → XP_047305999.1 ankyrin repeat domain-containing protein 17 isoform X13
-
XM_047450047.1 → XP_047306003.1 ankyrin repeat domain-containing protein 17 isoform X19
-
XM_017008016.3 → XP_016863505.1 ankyrin repeat domain-containing protein 17 isoform X18
-
XM_017008014.3 → XP_016863503.1 ankyrin repeat domain-containing protein 17 isoform X12
- UniProtKB/TrEMBL
-
B4DTP3
-
XM_005265673.5 → XP_005265730.1 ankyrin repeat domain-containing protein 17 isoform X11
- UniProtKB/TrEMBL
-
B4DTP3
- Conserved Domains (7) summary
-
- smart00248
Location:1082 → 1110
- ANK; ankyrin repeats
- COG0666
Location:1046 → 1272
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00204
Location:396 → 520
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:305 → 394
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:403 → 454
- Ank_4; Ankyrin repeats (many copies)
- pfam14942
Location:805 → 882
- Muted; Organelle biogenesis, Muted-like protein
- sd00045
Location:435 → 464
- ANK; ANK repeat [structural motif]
-
XM_047450048.1 → XP_047306004.1 ankyrin repeat domain-containing protein 17 isoform X21
-
XM_017008017.2 → XP_016863506.1 ankyrin repeat domain-containing protein 17 isoform X20
-
XM_047450044.1 → XP_047306000.1 ankyrin repeat domain-containing protein 17 isoform X15
-
XM_017008015.2 → XP_016863504.1 ankyrin repeat domain-containing protein 17 isoform X14
- UniProtKB/TrEMBL
-
B4DTP3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
76416991..76602444 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054349636.1 → XP_054205611.1 ankyrin repeat domain-containing protein 17 isoform X6
-
XM_054349631.1 → XP_054205606.1 ankyrin repeat domain-containing protein 17 isoform X1
-
XM_054349633.1 → XP_054205608.1 ankyrin repeat domain-containing protein 17 isoform X3
-
XM_054349638.1 → XP_054205613.1 ankyrin repeat domain-containing protein 17 isoform X8
-
XM_054349637.1 → XP_054205612.1 ankyrin repeat domain-containing protein 17 isoform X7
-
XM_054349632.1 → XP_054205607.1 ankyrin repeat domain-containing protein 17 isoform X2
-
XM_054349635.1 → XP_054205610.1 ankyrin repeat domain-containing protein 17 isoform X5
-
XM_054349634.1 → XP_054205609.1 ankyrin repeat domain-containing protein 17 isoform X4
-
XM_054349647.1 → XP_054205622.1 ankyrin repeat domain-containing protein 17 isoform X17
-
XM_054349646.1 → XP_054205621.1 ankyrin repeat domain-containing protein 17 isoform X16
-
XM_054349640.1 → XP_054205615.1 ankyrin repeat domain-containing protein 17 isoform X10
-
XM_054349639.1 → XP_054205614.1 ankyrin repeat domain-containing protein 17 isoform X9
-
XM_054349643.1 → XP_054205618.1 ankyrin repeat domain-containing protein 17 isoform X13
-
XM_054349649.1 → XP_054205624.1 ankyrin repeat domain-containing protein 17 isoform X19
-
XM_054349648.1 → XP_054205623.1 ankyrin repeat domain-containing protein 17 isoform X18
-
XM_054349642.1 → XP_054205617.1 ankyrin repeat domain-containing protein 17 isoform X12
-
XM_054349641.1 → XP_054205616.1 ankyrin repeat domain-containing protein 17 isoform X11
-
XM_054349651.1 → XP_054205626.1 ankyrin repeat domain-containing protein 17 isoform X21
-
XM_054349650.1 → XP_054205625.1 ankyrin repeat domain-containing protein 17 isoform X20
-
XM_054349645.1 → XP_054205620.1 ankyrin repeat domain-containing protein 17 isoform X15
-
XM_054349644.1 → XP_054205619.1 ankyrin repeat domain-containing protein 17 isoform X14