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    ADGB-DT ADGB divergent transcript [ Homo sapiens (human) ]

    Gene ID: 101928661, updated on 17-Sep-2024

    Summary

    Official Symbol
    ADGB-DTprovided by HGNC
    Official Full Name
    ADGB divergent transcriptprovided by HGNC
    Primary source
    HGNC:HGNC:55654
    See related
    Ensembl:ENSG00000237468 AllianceGenome:HGNC:55654
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See ADGB-DT in Genome Data Viewer
    Location:
    6q24.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (146594516..146598931, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (147787738..147792152, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (146915652..146920067, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene glutamate metabotropic receptor 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:146678820-146680019 Neighboring gene RNA, 5S ribosomal pseudogene 222 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:146709629-146710828 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17644 Neighboring gene Sharpr-MPRA regulatory region 4102 Neighboring gene RAB32, member RAS oncogene family Neighboring gene uncharacterized LOC124901517 Neighboring gene androglobin Neighboring gene uncharacterized LOC105378040

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125860.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL359547
      Related
      ENST00000419168.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      146594516..146598931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      147787738..147792152 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)