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    LINC02104 long intergenic non-protein coding RNA 2104 [ Homo sapiens (human) ]

    Gene ID: 101926940, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC02104provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2104provided by HGNC
    Primary source
    HGNC:HGNC:52959
    See related
    Ensembl:ENSG00000271334 AllianceGenome:HGNC:52959
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC02104 in Genome Data Viewer
    Location:
    5p13.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (39520431..39524708)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (39770619..39774896)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (39520533..39524810)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene complement C9 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:39380837-39382036 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:39382313-39383512 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_84809 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_84831 Neighboring gene DAB adaptor protein 2 Neighboring gene CFAP53 pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:39608583-39608764 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_84898 Neighboring gene integrator complex subunit 6 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_104632.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC026708, BF508204, BG207267, BX117422
      Related
      ENST00000603514.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      39520431..39524708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      39770619..39774896
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)