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    HYDIN2 HYDIN axonemal central pair apparatus protein 2 (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 100288805, updated on 17-Sep-2024

    Summary

    Official Symbol
    HYDIN2provided by HGNC
    Official Full Name
    HYDIN axonemal central pair apparatus protein 2 (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:33129
    See related
    MIM:610813; AllianceGenome:HGNC:33129
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HYDINP1
    Expression
    Biased expression in testis (RPKM 2.1), brain (RPKM 0.8) and 12 other tissues See more
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    Genomic context

    See HYDIN2 in Genome Data Viewer
    Location:
    1q21.1
    Exon count:
    56
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (146486332..146822034)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (147986385..148322048, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 Unlocalized Scaffold NT_167207.1 (132569..468683, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371235 Neighboring gene uncharacterized LOC124904407 Neighboring gene uncharacterized LOC105371233 Neighboring gene RNA, 5S ribosomal pseudogene 536 Neighboring gene uncharacterized LOC124900456 Neighboring gene NBPF member 12 Neighboring gene profilin 1 pseudogene 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • HYDIN, axonemal central pair apparatus protein pseudogene 1
    • HYDIN2, axonemal central pair apparatus protein (pseudogene)
    • hydrocephalus inducing homolog 2

    Clone Names

    • FLJ14665, KIAA1864, DKFZp761B238, DKFZp761M1613

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables triplet codon-amino acid adaptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_103556.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AB058767, AC241929, AC245407, AK027571, AL833826, AL834340, BG292092, DA303757, DR000174, H53415

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      146486332..146822034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      147986385..148322048 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_049745.1: Suppressed sequence

      Description
      NR_049745.1: This RefSeq was suppressed because it was not a good representation of the HYDIN2 locus.