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    C27D9.1 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173822, updated on 2-Nov-2024

    Summary

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    Official Symbol
    C27D9.1
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00016163
    Locus tag
    CELE_C27D9.1
    See related
    AllianceGenome:WB:WBGene00016163
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See C27D9.1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (4753413..4755603)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene MFS domain-containing protein Neighboring gene Exocyst complex component Sec8 Neighboring gene TransThyretin-Related family domain Neighboring gene Uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    2. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables alpha-(1->3)-fucosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in fucosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_494851.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      4753413..4755603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062450.9 → NP_494851.2  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494851.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18255
      Conserved Domains (1) summary
      pfam06542
      Location:67 → 507
      PHA-1; Regulator protein PHA-1
    Nucleotide Protein
    Heading Accession and Version

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