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    METRNL meteorin like, glial cell differentiation regulator [ Homo sapiens (human) ]

    Gene ID: 284207, updated on 2-Nov-2024

    Summary

    Official Symbol
    METRNLprovided by HGNC
    Official Full Name
    meteorin like, glial cell differentiation regulatorprovided by HGNC
    Primary source
    HGNC:HGNC:27584
    See related
    Ensembl:ENSG00000176845 MIM:616241; AllianceGenome:HGNC:27584
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to enable hormone activity. Predicted to be involved in several processes, including brown fat cell differentiation; positive regulation of brown fat cell differentiation; and response to muscle activity. Located in extracellular exosome. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in colon (RPKM 12.0), kidney (RPKM 11.4) and 25 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See METRNL in Genome Data Viewer
    Location:
    17q25.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (83079609..83095122)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (84099994..84115581)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (81037485..81052867)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor D Neighboring gene uncharacterized LOC124904095 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr17:80935960-80937159 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80942083-80942584 Neighboring gene Sharpr-MPRA regulatory region 7018 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80968063-80968585 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80975436-80976388 Neighboring gene uncharacterized LOC124904094 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:81027516-81028068 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81039455-81040037 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:81040631-81041190 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:81041191-81041749 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81042649-81043176 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81045109-81045746 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81045747-81046384 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81048933-81049568 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:81056168-81057164 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:81066069-81066894 Neighboring gene CAGE-defined high expression enhancer downstream of METRNL Neighboring gene uncharacterized LOC101930496 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:81081099-81082046 Neighboring gene uncharacterized LOC101929650 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:81099229-81099744 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:81099745-81100260 Neighboring gene uncharacterized LOC124904105

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC99788

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hormone activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in brown fat cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in energy homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in energy homeostasis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in fat cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in negative regulation of inflammatory response ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of brown fat cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of brown fat cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in response to cold ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in response to muscle activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular exosome HDA PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    meteorin-like protein
    Names
    cometin
    meteorin, glial cell differentiation regulator-like
    subfatin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004431.3NP_001004431.1  meteorin-like protein isoform 1 precursor

      See identical proteins and their annotated locations for NP_001004431.1

      Status: VALIDATED

      Source sequence(s)
      AC130371, BC082252, CF264755, DR760693
      Consensus CDS
      CCDS32779.1
      UniProtKB/Swiss-Prot
      B3KSJ5, Q641Q3, Q86VM0
      Related
      ENSP00000315731.6, ENST00000320095.12
    2. NM_001363853.2NP_001350782.1  meteorin-like protein isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC130371
      Consensus CDS
      CCDS86656.1
      Related
      ENSP00000458566.1, ENST00000570778.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      83079609..83095122
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187612.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      8456..24216 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      84099994..84115581
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)