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    LINC02395 long intergenic non-protein coding RNA 2395 [ Homo sapiens (human) ]

    Gene ID: 101927292, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC02395provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2395provided by HGNC
    Primary source
    HGNC:HGNC:53322
    See related
    Ensembl:ENSG00000257771 AllianceGenome:HGNC:53322
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC02395 in Genome Data Viewer
    Location:
    12q13.12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (49911953..49926339)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (49874963..49889345)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (50305736..50320122)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene Fas apoptotic inhibitory molecule 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50280844-50281632 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:50281633-50282421 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50282422-50283210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50288891-50289470 Neighboring gene long intergenic non-protein coding RNA 2396 Neighboring gene uncharacterized LOC124902930 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50335615-50336600 Neighboring gene uncharacterized LOC105369763 Neighboring gene NANOG-H3K4me1 hESC enhancers GRCh37_chr12:50338782-50339658 and GRCh37_chr12:50339659-50340534 Neighboring gene AQP5 and AQP2 antisense RNA 2 Neighboring gene aquaporin 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association study of obsessive-compulsive disorder.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110048.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC131157
      Related
      ENST00000546821.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      49911953..49926339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      49874963..49889345
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)