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    DOCK8-AS1 DOCK8 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 157983, updated on 17-Sep-2024

    Summary

    Official Symbol
    DOCK8-AS1provided by HGNC
    Official Full Name
    DOCK8 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:26436
    See related
    Ensembl:ENSG00000183784 AllianceGenome:HGNC:26436
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C9orf66
    Orthologs
    NEW
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    Genomic context

    See DOCK8-AS1 in Genome Data Viewer
    Location:
    9p24.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (213457..215750, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (207485..209777, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (213457..215750, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375942 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:139299-139912 Neighboring gene Zn regulated GTPase metalloprotein activator 1A Neighboring gene VISTA enhancer hs628 Neighboring gene uncharacterized LOC105375943 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19722 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19723 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19721 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19720 Neighboring gene dedicator of cytokinesis 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28115 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28116 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:285795-286994 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:330982-331957 Neighboring gene uncharacterized LOC105375945 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:444434-444993 Neighboring gene uncharacterized LOC124902108

    Genomic regions, transcripts, and products

    HIV-1 interactions

    Replication interactions

    Interaction Pubs
    Knockdown of chromosome 9 open reading frame 66 (C9orf66) by siRNA inhibits HIV-1 replication in HeLa P4/R5 cells PubMed

    Go to the HIV-1, Human Interaction Database

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_160804.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL158832
      Related
      ENST00000382387.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      213457..215750 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      207485..209777 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_152569.2: Suppressed sequence

      Description
      NM_152569.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.