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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001318835.1 → NP_001305764.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in both UTR's and the coding region but maintains the reading frame, compared to variant 1. This results in a protein that is shorter at the C-terminus, compared to isoform 1. The promoter used by this transcript is a hepatocyte specific promoter.
- Source sequence(s)
-
AK309975, AL135999
- UniProtKB/TrEMBL
-
Q59F08
- Related
-
ENST00000553896.5
- Conserved Domains (1) summary
-
- cl21454
Location:27 → 140
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
NM_005794.4 → NP_005785.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform 2
See identical proteins and their annotated locations for NP_005785.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, compared to variant 1, resulting in a shorter protein (isoform 2). The promoter used by this transcript is a hepatocyte-specific promoter.
- Source sequence(s)
-
AK222857, U31875
- Consensus CDS
-
CCDS9604.1
- UniProtKB/Swiss-Prot
- D3DS54, Q13268, Q53GS4, Q7Z789, Q9H2R2
- UniProtKB/TrEMBL
-
C9JZP6
- Related
- ENSP00000250383.7, ENST00000250383.11
- Conserved Domains (1) summary
-
- cl21454
Location:27 → 275
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
NM_182908.5 → NP_878912.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform 1
See identical proteins and their annotated locations for NP_878912.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1). The promoter and 5' terminal exon sequence is from an endogenous retroviral LTR. (PMID: 11944995) This promoter is specifically active in human monocyte-derived dendritic cells.
- Source sequence(s)
-
AL135999, BC002786
- Consensus CDS
-
CCDS41927.1
- UniProtKB/Swiss-Prot
-
Q13268
- Related
- ENSP00000344674.7, ENST00000344777.11
- Conserved Domains (1) summary
-
- cl25409
Location:27 → 226
- SDR; Short-chain dehydrogenases/reductases (SDR)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
23630115..23645639
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005267249.1 → XP_005267306.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X1
See identical proteins and their annotated locations for XP_005267306.1
- UniProtKB/Swiss-Prot
- D3DS54, Q13268, Q53GS4, Q7Z789, Q9H2R2
- UniProtKB/TrEMBL
-
C9JZP6
- Related
- ENSP00000401213.2, ENST00000432832.6
- Conserved Domains (1) summary
-
- cl21454
Location:27 → 275
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_011536339.3 → XP_011534641.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X2
See identical proteins and their annotated locations for XP_011534641.1
- UniProtKB/TrEMBL
-
H0YJP4
- Related
- ENSP00000451895.1, ENST00000557535.5
- Conserved Domains (1) summary
-
- cl21454
Location:1 → 199
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_006720001.4 → XP_006720064.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X1
See identical proteins and their annotated locations for XP_006720064.1
- UniProtKB/Swiss-Prot
- D3DS54, Q13268, Q53GS4, Q7Z789, Q9H2R2
- UniProtKB/TrEMBL
-
C9JZP6
- Conserved Domains (1) summary
-
- cl21454
Location:27 → 275
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_011536338.2 → XP_011534640.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X2
See identical proteins and their annotated locations for XP_011534640.1
- UniProtKB/TrEMBL
-
H0YJP4
- Conserved Domains (1) summary
-
- cl21454
Location:1 → 199
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_047430874.1 → XP_047286830.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- D3DS54, Q13268, Q53GS4, Q7Z789, Q9H2R2
RNA
-
XR_007063975.1 RNA Sequence
-
XR_007063976.1 RNA Sequence
-
XR_007063974.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
17830743..17846267
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054375248.1 → XP_054231223.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- D3DS54, Q13268, Q53GS4, Q7Z789, Q9H2R2
-
XM_054375252.1 → XP_054231227.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X2
-
XM_054375249.1 → XP_054231224.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- D3DS54, Q13268, Q53GS4, Q7Z789, Q9H2R2
-
XM_054375251.1 → XP_054231226.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X2
-
XM_054375250.1 → XP_054231225.1 dehydrogenase/reductase SDR family member 2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- D3DS54, Q13268, Q53GS4, Q7Z789, Q9H2R2
RNA
-
XR_008488811.1 RNA Sequence
-
XR_008488812.1 RNA Sequence
-
XR_008488810.1 RNA Sequence