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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_042855.1 RefSeqGene
- Range
-
4964..658841
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001313741.1 → NP_001300670.1 phospholipid-transporting ATPase IB isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and lacks an alternate in-frame exon in the central coding region. These differences cause translation initiation at a downstream start codon and result in an isoform (2) with a shorter N-terminus, and lacking an internal segment, compared to isoform 1.
- Source sequence(s)
-
AK094653, AK126031, AK127263, AK302980, AL136438, AL138815, AL139004, AL390129, AL669971, BP396213, HY026915
- UniProtKB/TrEMBL
- B7Z880, Q6ZU25
- Conserved Domains (6) summary
-
- TIGR01652
Location:28 → 1041
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
- pfam00122
Location:85 → 304
- E1-E2_ATPase; E1-E2 ATPase
- pfam13246
Location:466 → 564
- Cation_ATPase; Cation transport ATPase (P-type)
- pfam16209
Location:17 → 79
- PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
- pfam16212
Location:808 → 1034
- PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
- cl21460
Location:776 → 805
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
NM_001411005.1 → NP_001397934.1 phospholipid-transporting ATPase IB isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL136438, AL138815, AL138958, AL139004, AL157366, AL356316, AL669971
- Consensus CDS
-
CCDS91793.1
- UniProtKB/TrEMBL
-
A0A804HKW9
- Related
- ENSP00000508103.1, ENST00000682472.1
-
NM_001411006.1 → NP_001397935.1 phospholipid-transporting ATPase IB isoform 4
Status: REVIEWED
- Source sequence(s)
-
AL136438, AL138815, AL138958, AL157366, AL356316, AL669971
- Consensus CDS
-
CCDS91792.1
- UniProtKB/TrEMBL
-
A0A804HI09
- Related
- ENSP00000506846.1, ENST00000683960.1
-
NM_016529.6 → NP_057613.4 phospholipid-transporting ATPase IB isoform 1
See identical proteins and their annotated locations for NP_057613.4
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AF236871, AK094653, AK126031, AK127263, AL136438, AL138815, AL138958, AL139004, AL390129, AL669971, BP396213, DA326706
- Consensus CDS
-
CCDS41873.1
- UniProtKB/Swiss-Prot
- Q6ZSP3, Q9H527, Q9NPU6, Q9NTI2, Q9NTL2, Q9NYM3
- UniProtKB/TrEMBL
-
A0A804HLG3
- Related
- ENSP00000371070.2, ENST00000381655.7
- Conserved Domains (1) summary
-
- TIGR01652
Location:68 → 1106
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000013.11 Reference GRCh38.p14 Primary Assembly
- Range
-
25371974..26025851
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011535107.4 → XP_011533409.1 phospholipid-transporting ATPase IB isoform X8
- UniProtKB/TrEMBL
-
A0A804HLG3
- Related
- ENSP00000508339.1, ENST00000683303.1
- Conserved Domains (6) summary
-
- TIGR01652
Location:68 → 1051
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
- pfam00122
Location:125 → 344
- E1-E2_ATPase; E1-E2 ATPase
- pfam13246
Location:506 → 604
- Cation_ATPase; Cation transport ATPase (P-type)
- pfam16209
Location:57 → 119
- PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
- pfam16212
Location:848 → 1054
- PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
- cl21460
Location:816 → 845
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_011535113.3 → XP_011533415.1 phospholipid-transporting ATPase IB isoform X5
- UniProtKB/TrEMBL
-
A0A804HKN1
- Conserved Domains (3) summary
-
- pfam00122
Location:125 → 344
- E1-E2_ATPase; E1-E2 ATPase
- pfam13246
Location:506 → 604
- Cation_ATPase; Cation transport ATPase (P-type)
- pfam16209
Location:57 → 119
- PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
-
XM_017020626.2 → XP_016876115.1 phospholipid-transporting ATPase IB isoform X7
- UniProtKB/TrEMBL
-
A0A804HKN1
-
XM_017020625.3 → XP_016876114.1 phospholipid-transporting ATPase IB isoform X6
- UniProtKB/TrEMBL
-
A0A804HKN1
-
XM_047430383.1 → XP_047286339.1 phospholipid-transporting ATPase IB isoform X1
-
XM_005266419.2 → XP_005266476.1 phospholipid-transporting ATPase IB isoform X1
See identical proteins and their annotated locations for XP_005266476.1
- UniProtKB/TrEMBL
-
Q6ZU25
- Related
- ENSP00000507489.1, ENST00000684424.1
- Conserved Domains (1) summary
-
- TIGR01652
Location:28 → 1066
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
-
XM_011535104.3 → XP_011533406.1 phospholipid-transporting ATPase IB isoform X2
- UniProtKB/TrEMBL
-
Q6ZU25
- Related
-
ENST00000683945.1
- Conserved Domains (6) summary
-
- TIGR01652
Location:34 → 1066
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
- pfam00122
Location:85 → 304
- E1-E2_ATPase; E1-E2 ATPase
- pfam13246
Location:466 → 564
- Cation_ATPase; Cation transport ATPase (P-type)
- pfam16209
Location:34 → 79
- PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
- pfam16212
Location:808 → 1059
- PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
- cl21460
Location:776 → 805
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_011535109.4 → XP_011533411.1 phospholipid-transporting ATPase IB isoform X3
See identical proteins and their annotated locations for XP_011533411.1
- UniProtKB/TrEMBL
-
Q6ZU25
- Conserved Domains (5) summary
-
- TIGR01652
Location:1 → 946
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
- pfam00122
Location:2 → 184
- E1-E2_ATPase; E1-E2 ATPase
- pfam13246
Location:346 → 444
- Cation_ATPase; Cation transport ATPase (P-type)
- pfam16212
Location:688 → 939
- PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
- cl21460
Location:656 → 685
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_024449369.1 → XP_024305137.1 phospholipid-transporting ATPase IB isoform X4
- UniProtKB/TrEMBL
-
Q6ZU25
- Conserved Domains (1) summary
-
- TIGR01652
Location:1 → 908
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NT_187593.1 Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
489..133501 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060937.1 Alternate T2T-CHM13v2.0
- Range
-
24581610..25239722
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054374602.1 → XP_054230577.1 phospholipid-transporting ATPase IB isoform X9
-
XM_054374605.1 → XP_054230580.1 phospholipid-transporting ATPase IB isoform X10
-
XM_054374606.1 → XP_054230581.1 phospholipid-transporting ATPase IB isoform X5
-
XM_054374608.1 → XP_054230583.1 phospholipid-transporting ATPase IB isoform X7
-
XM_054374607.1 → XP_054230582.1 phospholipid-transporting ATPase IB isoform X6
-
XM_054374601.1 → XP_054230576.1 phospholipid-transporting ATPase IB isoform X1
-
XM_054374599.1 → XP_054230574.1 phospholipid-transporting ATPase IB isoform X1
-
XM_054374600.1 → XP_054230575.1 phospholipid-transporting ATPase IB isoform X2
-
XM_054374603.1 → XP_054230578.1 phospholipid-transporting ATPase IB isoform X3
-
XM_054374604.1 → XP_054230579.1 phospholipid-transporting ATPase IB isoform X4