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    Fstl1 follistatin-like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 79210, updated on 2-Nov-2024

    Summary

    Official Symbol
    Fstl1provided by RGD
    Official Full Name
    follistatin-like 1provided by RGD
    Primary source
    RGD:68955
    See related
    EnsemblRapid:ENSRNOG00000002746 AllianceGenome:RGD:68955
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Frp; Fstl
    Summary
    Predicted to enable calcium ion binding activity and heparin binding activity. Predicted to be involved in several processes, including endothelial cell differentiation; endothelial cell migration; and regulation of BMP signaling pathway. Predicted to act upstream of or within hematopoietic stem cell homeostasis. Predicted to be active in extracellular region. Orthologous to human FSTL1 (follistatin like 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Heart (RPKM 698.9), Lung (RPKM 673.0) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Fstl1 in Genome Data Viewer
    Location:
    11q21
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (76400870..76454053, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (62895391..62948581, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (65791196..65845721, complement)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene butyrophilin-like 12 Neighboring gene uncharacterized LOC134481074 Neighboring gene uncharacterized LOC134481075 Neighboring gene ribosomal protein S11, pseudogene 13 Neighboring gene NADH:ubiquinone oxidoreductase subunit B4

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Clone Names

    • MGC93410

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables heparin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endothelial cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endothelial cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in endothelial cell migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endothelial cell migration ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within hematopoietic stem cell homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of BMP signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    follistatin-related protein 1
    Names
    follistatin-like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024369.2NP_077345.1  follistatin-related protein 1 precursor

      See identical proteins and their annotated locations for NP_077345.1

      Status: PROVISIONAL

      Source sequence(s)
      BC087014
      UniProtKB/Swiss-Prot
      Q62632
      UniProtKB/TrEMBL
      A0A8I5Y6A3
      Related
      ENSRNOP00000095289.2, ENSRNOT00000103472.3
      Conserved Domains (5) summary
      smart00274
      Location:2951
      FOLN; Follistatin-N-terminal domain-like
      smart00280
      Location:5296
      KAZAL; Kazal type serine protease inhibitors
      pfam13499
      Location:147218
      EF-hand_7; EF-hand domain pair
      cl08302
      Location:147218
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      cl17735
      Location:231278
      VWC; von Willebrand factor type C domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      76400870..76454053 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)