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    MPEG1 macrophage expressed 1 [ Homo sapiens (human) ]

    Gene ID: 219972, updated on 28-Oct-2024

    Summary

    Official Symbol
    MPEG1provided by HGNC
    Official Full Name
    macrophage expressed 1provided by HGNC
    Primary source
    HGNC:HGNC:29619
    See related
    Ensembl:ENSG00000197629 MIM:610390; AllianceGenome:HGNC:29619
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    P-2; MPG1; MPS1; IMD77; Mpg-1
    Summary
    Enables wide pore channel activity. Involved in defense response to Gram-negative bacterium and defense response to Gram-positive bacterium. Located in cytoplasmic vesicle. Is active in phagolysosome membrane. Implicated in primary immunodeficiency disease. [provided by Alliance of Genome Resources, Oct 2024]
    Orthologs
    NEW
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    Genomic context

    See MPEG1 in Genome Data Viewer
    Location:
    11q12.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (59208510..59212927, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (59157683..59162100, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (58975983..58980400, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene basic proline-rich protein-like Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:58938742-58939282 Neighboring gene Sharpr-MPRA regulatory region 11967 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3361 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:58940291-58941119 Neighboring gene uncharacterized LOC124902675 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3362 Neighboring gene deltex E3 ubiquitin ligase 4 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3363 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:58967822-58969021 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4752 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4753 Neighboring gene RNA, 7SL, cytoplasmic 42, pseudogene Neighboring gene tryptophanyl-tRNA synthetase 1 pseudogene 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Tat tat HIV-1 Tat downregulates the expression of macrophage expressed 1 (MPEG1) in human primary T cells PubMed

    Go to the HIV-1, Human Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC132657, MGC138435

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables wide pore channel activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in antibacterial innate immune response ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in antigen processing and presentation of exogenous peptide antigen ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in antigen processing and presentation of exogenous peptide antigen via MHC class I ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in defense response to Gram-negative bacterium IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in defense response to Gram-negative bacterium ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in defense response to Gram-positive bacterium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in defense response to Gram-positive bacterium ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in defense response to bacterium IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in dendritic cell antigen processing and presentation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in phagocytic vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in phagocytic vesicle membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in phagolysosome membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    macrophage-expressed gene 1 protein
    Names
    macrophage expressed gene 1
    macrophage gene 1 protein
    perforin 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039396.2NP_001034485.1  macrophage-expressed gene 1 protein precursor

      See identical proteins and their annotated locations for NP_001034485.1

      Status: VALIDATED

      Source sequence(s)
      AP002358, AW205154, BC104997, DA946058
      Consensus CDS
      CCDS41650.1
      UniProtKB/Swiss-Prot
      Q2M1T6, Q2M385, Q8TEF8
      UniProtKB/TrEMBL
      B3KUT2
      Related
      ENSP00000354335.3, ENST00000361050.4
      Conserved Domains (1) summary
      pfam01823
      Location:125341
      MACPF; MAC/Perforin domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      59208510..59212927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      59157683..59162100 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)