NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_031847.1 RefSeqGene
- Range
-
5621..13026
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001035235.4 → NP_001030312.3 steroid receptor RNA activator 1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC011399, BC040043
- Consensus CDS
-
CCDS34245.2
- UniProtKB/Swiss-Prot
- Q6NVU9, Q8IXM1, Q9HD13, Q9HD14, Q9HD15
- UniProtKB/TrEMBL
-
B3KNT3
- Related
- ENSP00000337513.6, ENST00000336283.9
- Conserved Domains (1) summary
-
- pfam07304
Location:71 → 207
- SRA1; Steroid receptor RNA activator (SRA1)
-
NM_001253764.2 → NP_001240693.1 steroid receptor RNA activator 1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) retains a segment in the 5' coding region and lacks a downstream coding exon, compared to variant 1. The encoded isoform (2) is shorter and has a distinct segment in the N-terminal region, compared to isoform 1.
- Source sequence(s)
-
AC011399, BC067895, BQ052761, BU553214
- Conserved Domains (1) summary
-
- pfam07304
Location:103 → 191
- SRA1; Steroid receptor RNA activator (SRA1)
RNA
-
NR_045586.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5' region, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AF318361, AI140060, BC040043, BQ052761, DQ286291
-
NR_045587.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) retains a segment in the 5' region, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC011399, BC040043, BC067895, BQ052761, DA311407
- Related
-
ENST00000602775.5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
140550067..140558093 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
141075497..141083524 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)