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    FLJ20712 uncharacterized FLJ20712 [ Homo sapiens (human) ]

    Gene ID: 55025, updated on 22-Oct-2024

    Summary

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    Gene symbol
    FLJ20712
    Gene description
    uncharacterized FLJ20712
    See related
    Ensembl:ENSG00000173862
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Orthologs
    all
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    Genomic context

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    See FLJ20712 in Genome Data Viewer
    Location:
    7p14.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (33725981..33728604)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (33865747..33868369)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (33765593..33768216)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 9 Neighboring gene RAB3A interacting protein like 1 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr7:33569166-33569387 Neighboring gene uncharacterized LOC124901611 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:33744844-33745712 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:33790572-33791771 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:33811963-33813162 Neighboring gene uncharacterized LOC124901612 Neighboring gene uncharacterized LOC124901613

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment. Kim J, et al. Nat Methods, 2005 Jan. PMID 15782160
    2. Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. Maruyama K, et al. Gene, 1994 Jan 28. PMID 8125298
    3. Toward an understanding of the protein interaction network of the human liver. Wang J, et al. Mol Syst Biol, 2011 Oct 11. PMID 21988832, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • FLJ20712

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_165282.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC008080
      Related
      ENST00000311067.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      33725981..33728604
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      33865747..33868369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_017937.1: Suppressed sequence

      Description
      NM_017937.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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