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    PF3D7_1212900 bromodomain protein 2, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811180, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1212900
    Gene description
    bromodomain protein 2, putative
    Locus tag
    PF3D7_1212900
    See related
    PlasmoDB:PF3D7_1212900; VEuPathDB:PF3D7_1212900
    Gene type
    protein coding
    RNA name
    bromodomain protein 2, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1212900 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Sequence:
    Chromosome: 12; NC_037284.1 (568569..571835, complement)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit A, putative Neighboring gene succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Plasmodium Falciparum Bromodomain Protein Regulates Invasion Gene Expression. Josling GA, et al. Cell Host Microbe, 2015 Jun 10. PMID 26067602
    2. The Putative Bromodomain Protein PfBDP7 of the Human Malaria Parasite Plasmodium Falciparum Cooperates With PfBDP1 in the Silencing of Variant Surface Antigen Expression. Quinn JE, et al. Front Cell Dev Biol, 2022. PMID 35493110, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    5. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bromodomain protein 2, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      568569..571835 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350500.1 → XP_001350536.1  bromodomain protein 2, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350536.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024W5S6, A0A0L7KD96, Q8I5S4, W7FMQ2, W7K2I5
      Conserved Domains (2) summary
      cd04369
      Location:502 → 600
      Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
      COG5076
      Location:378 → 602
      COG5076; Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
    Nucleotide Protein
    Heading Accession and Version

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