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    PF3D7_1225100 isoleucine--tRNA ligase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811294, updated on 17-May-2024

    Summary

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    Gene symbol
    PF3D7_1225100
    Gene description
    isoleucine--tRNA ligase, putative
    Primary source
    PlasmoDB:PF3D7_1225100
    Locus tag
    PF3D7_1225100
    See related
    VEuPathDB:PF3D7_1225100
    Gene type
    protein coding
    RNA name
    isoleucine--tRNA ligase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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    Genomic context

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    See PF3D7_1225100 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Sequence:
    Chromosome: 12; NC_037284.1 (1018506..1024008)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3B subunit 6, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Validation of isoleucine utilization targets in Plasmodium falciparum. Istvan ES, et al. Proc Natl Acad Sci U S A, 2011 Jan 25. PMID 21205898, Free PMC Article
    2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to xenobiotic stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in apicoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    isoleucine--tRNA ligase, putative
    XP_001350648.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      1018506..1024008
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350612.1 → XP_001350648.1  isoleucine--tRNA ligase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350648.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024WNI9, A0A0L7KLC8, A0A2I0BYH6, Q8I5G6
      Conserved Domains (1) summary
      COG0060
      Location:217 → 1692
      IleS; Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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