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    PF3D7_1248000 tRNA-splicing endonuclease, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811512, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1248000
    Gene description
    tRNA-splicing endonuclease, putative
    Locus tag
    PF3D7_1248000
    See related
    PlasmoDB:PF3D7_1248000; VEuPathDB:PF3D7_1248000
    Gene type
    protein coding
    RNA name
    tRNA-splicing endonuclease, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1248000 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    1
    Sequence:
    Chromosome: 12; NC_037284.1 (1973584..1974246)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene dipeptidyl aminopeptidase 2 Neighboring gene U3 small nucleolar RNA-associated protein 11, putative Neighboring gene methyltransferase, putative Neighboring gene pre-mRNA-splicing factor RBM22, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables tRNA-intron endonuclease activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within tRNA splicing, via endonucleolytic cleavage and ligation ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    tRNA-splicing endonuclease, putative
    XP_001350864.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      1973584..1974246
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350828.2 → XP_001350864.2  tRNA-splicing endonuclease, putative [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VPI6, A0A0L1IAY2, A0A144A1E9, A0A2I0BZ74
      Conserved Domains (1) summary
      cl40440
      Location:126 → 201
      PDDEXK_nuclease-like; PDDEXK family nucleases
    Nucleotide Protein
    Heading Accession and Version

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