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    PF3D7_1351400 60S ribosomal protein L17, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814233, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1351400
    Gene description
    60S ribosomal protein L17, putative
    Locus tag
    PF3D7_1351400
    See related
    PlasmoDB:PF3D7_1351400; VEuPathDB:PF3D7_1351400
    Gene type
    protein coding
    RNA name
    60S ribosomal protein L17, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1351400 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    3
    Sequence:
    Chromosome: 13; NC_004331.3 (2052108..2053384)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene ncRNA Neighboring gene glycerol kinase Neighboring gene inner membrane complex protein 1f, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis. Wong W, et al. Nat Microbiol, 2017 Mar 13. PMID 28288098, Free PMC Article
    2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L17, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      2052108..2053384
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350191.1 → XP_001350227.1  60S ribosomal protein L17, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350227.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VYM5, A0A024WJD5, A0A024X178, A0A0L1IBA6, A0A0L7KGP8, Q8IDI5, W4J0A2, W7EZ29, W7FZB5, W7KA36
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 189
      PTZ00178; 60S ribosomal protein L17; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    1VX7_W.1
    3J79_W.1
    5UMD_W.1

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