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    PF3D7_1304900 DNA-directed RNA polymerase II subunit RPB11, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814002, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1304900
    Gene description
    DNA-directed RNA polymerase II subunit RPB11, putative
    Locus tag
    PF3D7_1304900
    See related
    PlasmoDB:PF3D7_1304900; VEuPathDB:PF3D7_1304900
    Gene type
    protein coding
    RNA name
    DNA-directed RNA polymerase II subunit RPB11, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1304900 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    4
    Sequence:
    Chromosome: 13; NC_004331.3 (245199..246175)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene cyclin Neighboring gene ncRNA Neighboring gene MCL1 domain-containing protein, putative Neighboring gene protein AMR3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    2. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables DNA-directed 5'-3' RNA polymerase activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of RNA polymerase II, core complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase II subunit RPB11, putative
    XP_001349775.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      245199..246175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349739.1 → XP_001349775.1  DNA-directed RNA polymerase II subunit RPB11, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349775.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8IER7
      UniProtKB/TrEMBL
      A0A024W2U3, A0A024X2L4, A0A0L7KBH4, A0A2I0BWR5, W4IBX7, W7EWQ8
      Conserved Domains (1) summary
      cd06926
      Location:20 → 109
      RNAP_II_RPB11; RPB11 subunit of Eukaryotic RNA polymerase II
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IER7.1

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