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    PF3D7_1416800 lysine--tRNA ligase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811747, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1416800
    Gene description
    lysine--tRNA ligase, putative
    Locus tag
    PF3D7_1416800
    See related
    PlasmoDB:PF3D7_1416800; VEuPathDB:PF3D7_1416800
    Gene type
    protein coding
    RNA name
    lysine--tRNA ligase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1416800 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    1
    Sequence:
    Chromosome: 14; NC_037283.1 (682778..684802)

    Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved protein, unknown function Neighboring gene prefoldin subunit 2, putative Neighboring gene inner membrane complex protein 1l

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037283.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Selective inhibition of an apicoplastic aminoacyl-tRNA synthetase from Plasmodium falciparum. Hoen R, et al. Chembiochem, 2013 Mar 4. PMID 23444099
    2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables lysine-tRNA ligase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within lysyl-tRNA aminoacylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in apicoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysine--tRNA ligase, putative
    XP_001348339.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037283.1 Reference assembly

      Range
      682778..684802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001348303.1 → XP_001348339.1  lysine--tRNA ligase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001348339.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V0B3, A0A024VKI0, A0A024W0Z1, A0A024WGW0, A0A0L1I351, A0A0L7KE15, Q8ILS8, W4IWR8, W7EUM9, W7F9X5, W7J560, W7JM79
      Conserved Domains (1) summary
      PRK00484
      Location:76 → 672
      lysS; lysyl-tRNA synthetase; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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