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    PF3D7_0300800 rifin [ Plasmodium falciparum 3D7 ]

    Gene ID: 4794143, updated on 17-May-2024

    Summary

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    Gene symbol
    PF3D7_0300800
    Gene description
    rifin
    Locus tag
    PF3D7_0300800
    See related
    PlasmoDB:PF3D7_0300800; VEuPathDB:PF3D7_0300800
    Gene type
    protein coding
    RNA name
    rifin
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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    Genomic context

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    See PF3D7_0300800 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_000521.4 (64572..65783)

    Chromosome 3 - NC_000521.4Genomic Context describing neighboring genes Neighboring gene Plasmodium exported protein, unknown function, fragment Neighboring gene rifin Neighboring gene stevor-like Neighboring gene acyl-CoA synthetase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000521.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RIFINs are adhesins implicated in severe Plasmodium falciparum malaria. Goel S, et al. Nat Med, 2015 Apr. PMID 25751816
    2. Rifins: a second family of clonally variant proteins expressed on the surface of red cells infected with Plasmodium falciparum. Kyes SA, et al. Proc Natl Acad Sci U S A, 1999 Aug 3. PMID 10430943, Free PMC Article
    3. The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. Bowman S, et al. Nature, 1999 Aug 5. PMID 10448855
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within adhesion of symbiont to microvasculature IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within antigenic variation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within modulation by symbiont of host erythrocyte aggregation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Maurer's cleft IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in host cell plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in symbiont-containing vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rifin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000521.4 Reference assembly

      Range
      64572..65783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351049.1 → XP_001351085.1  rifin [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351085.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VCT4, A0A2I0BTX9, O97328
      Conserved Domains (1) summary
      TIGR01477
      Location:1 → 303
      RIFIN; variant surface antigen, rifin family
    Nucleotide Protein
    Heading Accession and Version

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