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    PF3D7_0321600 ATP-dependent RNA helicase DDX42, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814530, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0321600
    Gene description
    ATP-dependent RNA helicase DDX42, putative
    Locus tag
    PF3D7_0321600
    See related
    PlasmoDB:PF3D7_0321600; VEuPathDB:PF3D7_0321600
    Gene type
    protein coding
    RNA name
    ATP-dependent RNA helicase DDX42, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0321600 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_000521.4 (900857..903369)

    Chromosome 3 - NC_000521.4Genomic Context describing neighboring genes Neighboring gene protein kinase, putative Neighboring gene peptidase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene WD repeat-containing protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000521.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. Bowman S, et al. Nature, 1999 Aug 5. PMID 10448855
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DDX42, putative
    XP_001351286.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000521.4 Reference assembly

      Range
      900857..903369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351250.1 → XP_001351286.1  ATP-dependent RNA helicase DDX42, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351286.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VEB0, A0A024WDF5, A0A0L0CW41, A0A0L1IF16, A0A0L7KDH1, A0A0L7M1G2, A0A2I0BTF6, O97290, W4IPG6, W7FLR5, W7G4Q7, W7JU62
      Conserved Domains (1) summary
      COG0513
      Location:229 → 684
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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