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    PF3D7_0314700 RING finger protein RNF1 [ Plasmodium falciparum 3D7 ]

    Gene ID: 814460, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0314700
    Gene description
    RING finger protein RNF1
    Locus tag
    PF3D7_0314700
    See related
    PlasmoDB:PF3D7_0314700; VEuPathDB:PF3D7_0314700
    Gene type
    protein coding
    RNA name
    RING finger protein RNF1
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0314700 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_000521.4 (589002..592547, complement)

    Chromosome 3 - NC_000521.4Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium membrane protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000521.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional Profiling Defines Histone Acetylation as a Regulator of Gene Expression during Human-to-Mosquito Transmission of the Malaria Parasite Plasmodium falciparum. Ngwa CJ, et al. Front Cell Infect Microbiol, 2017. PMID 28791254, Free PMC Article
    2. The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. Bowman S, et al. Nature, 1999 Aug 5. PMID 10448855
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables histone binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger protein RNF1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000521.4 Reference assembly

      Range
      589002..592547 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351180.1 → XP_001351216.1  RING finger protein RNF1 [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351216.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7KB71, O97260, W7G1K5, W7KLW4
      Conserved Domains (2) summary
      cd16454
      Location:1131 → 1172
      RING-H2_PA-TM-RING; RING finger, H2 subclass, found in the PA-TM-RING ubiquitin ligase family
      NF000535
      Location:968 → 1042
      MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    Nucleotide Protein
    Heading Accession and Version

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