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    PF3D7_0406100 V-type proton ATPase subunit B [ Plasmodium falciparum 3D7 ]

    Gene ID: 812397, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0406100
    Gene description
    V-type proton ATPase subunit B
    Locus tag
    PF3D7_0406100
    See related
    PlasmoDB:PF3D7_0406100; VEuPathDB:PF3D7_0406100
    Gene type
    protein coding
    RNA name
    V-type proton ATPase subunit B
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0406100 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_004318.2 (323267..325225, complement)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene apical sushi protein Neighboring gene conserved protein, unknown function Neighboring gene sexual stage-specific protein precursor Neighboring gene cytosolic glyoxalase II

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and characterization of the vacuolar ATPase B subunit from Plasmodium falciparum. Karcz SR, et al. Mol Biochem Parasitol, 1994 May. PMID 7935619
    2. Eps15 homology domain containing protein of Plasmodium falciparum (PfEHD) associates with endocytosis and vesicular trafficking towards neutral lipid storage site. Thakur V, et al. Biochim Biophys Acta, 2015 Nov. PMID 26284889
    3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables proton-transporting ATPase activity, rotational mechanism TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within vacuolar acidification TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    V-type proton ATPase subunit B
    XP_001351374.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      323267..325225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351338.1 → XP_001351374.1  V-type proton ATPase subunit B [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351374.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q25691
      UniProtKB/TrEMBL
      A0A024VD24, A0A024VV60, A0A024WE60, A0A024WW71, A0A024XDB5, A0A0L1I699, A0A0L7K7Y3, A0A0L7LXD5, Q6ZMA8, W4IMC7, W4J5M8, W7F266, W7G106, W7JUM4, W7KA54
      Conserved Domains (1) summary
      TIGR01040
      Location:31 → 493
      V-ATPase_V1_B; V-type (H+)-ATPase V1, B subunit
    Nucleotide Protein
    Heading Accession and Version

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