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    PF3D7_0506200 TATA-box-binding protein [ Plasmodium falciparum 3D7 ]

    Gene ID: 812892, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0506200
    Gene description
    TATA-box-binding protein
    Locus tag
    PF3D7_0506200
    See related
    PlasmoDB:PF3D7_0506200; VEuPathDB:PF3D7_0506200
    Gene type
    protein coding
    RNA name
    TATA-box-binding protein
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0506200 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_004326.2 (259764..260747)

    Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene 60S ribosomal subunit protein L24, putative Neighboring gene conserved protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004326.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plasmodium falciparum: Preinitiation complex occupancy of active and inactive promoters during erythrocytic stage. Gopalakrishnan AM, et al. Exp Parasitol, 2009 Jan. PMID 18951895
    2. Recombinant and native Plasmodium falciparum TATA-binding-protein binds to a specific TATA box element in promoter regions. Ruvalcaba-Salazar OK, et al. Mol Biochem Parasitol, 2005 Apr. PMID 15760658
    3. Identification of Novel Pre-Erythrocytic Malaria Antigen Candidates for Combination Vaccines with Circumsporozoite Protein. Speake C, et al. PLoS One, 2016. PMID 27434123, Free PMC Article
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of transcription factor TFIID complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TATA-box-binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004326.2 Reference assembly

      Range
      259764..260747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351584.1 → XP_001351620.1  TATA-box-binding protein [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001351620.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VBU1, A0A024VFM1, A0A024WUW8, A0A024XBQ2, A0A0L7K730, A0A0L7M637, Q8I440, W4ILY7, W4IUB3, W7FK77, W7FN28, W7K9L0
      Conserved Domains (1) summary
      cd04516
      Location:150 → 325
      TBP_eukaryotes; eukaryotic TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation ...
    Nucleotide Protein
    Heading Accession and Version

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