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    PF3D7_0810600 ATP-dependent RNA helicase DBP1, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 2655295, updated on 17-May-2024

    Summary

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    Gene symbol
    PF3D7_0810600
    Gene description
    ATP-dependent RNA helicase DBP1, putative
    Primary source
    PlasmoDB:PF3D7_0810600
    Locus tag
    PF3D7_0810600
    See related
    VEuPathDB:PF3D7_0810600
    Gene type
    protein coding
    RNA name
    ATP-dependent RNA helicase DBP1, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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    Genomic context

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    See PF3D7_0810600 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Sequence:
    Chromosome: 8; NC_004329.3 (541971..544796)

    Chromosome 8 - NC_004329.3Genomic Context describing neighboring genes Neighboring gene aquaporin, putative Neighboring gene protein phosphatase PPM7, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene hydroxymethyldihydropterin pyrophosphokinase-dihydropteroate synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004329.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    2. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
    3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    4. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    5. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables RNA binding HDA PubMed 
    enables mRNA binding HDA PubMed 
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DBP1, putative
    XP_001349420.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004329.3 Reference assembly

      Range
      541971..544796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349384.1 → XP_001349420.1  ATP-dependent RNA helicase DBP1, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349420.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VSB3, A7U5X1, Q8IAU1, W7K642
      Conserved Domains (1) summary
      COG0513
      Location:377 → 781
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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