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    PF3D7_0807900 tyrosine--tRNA ligase [ Plasmodium falciparum 3D7 ]

    Gene ID: 2655248, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0807900
    Gene description
    tyrosine--tRNA ligase
    Locus tag
    PF3D7_0807900
    See related
    PlasmoDB:PF3D7_0807900; VEuPathDB:PF3D7_0807900
    Gene type
    protein coding
    RNA name
    tyrosine--tRNA ligase
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0807900 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Sequence:
    Chromosome: 8; NC_004329.3 (402595..404141)

    Chromosome 8 - NC_004329.3Genomic Context describing neighboring genes Neighboring gene serine protease DegP Neighboring gene 26S proteasome regulatory subunit RPN10, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene AP-3 complex subunit delta, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004329.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses. Bhatt TK, et al. Nat Commun, 2011 Nov 8. PMID 22068597
    2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables host cell surface receptor binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables tyrosine-tRNA ligase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in host cell cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    tyrosine--tRNA ligase
    XP_001349444.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004329.3 Reference assembly

      Range
      402595..404141
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349408.1 → XP_001349444.1  tyrosine--tRNA ligase [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349444.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7KC07, A0A2I0BXE8, Q8IAR7
      Conserved Domains (1) summary
      PTZ00126
      Location:1 → 373
      PTZ00126; tyrosyl-tRNA synthetase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    3VGJ_A.1
    3VGJ_B.1

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