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    PF3D7_0925900 parasitophorous vacuolar protein 5, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813534, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0925900
    Gene description
    parasitophorous vacuolar protein 5, putative
    Locus tag
    PF3D7_0925900
    See related
    PlasmoDB:PF3D7_0925900; VEuPathDB:PF3D7_0925900
    Gene type
    protein coding
    RNA name
    parasitophorous vacuolar protein 5, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
    NEW
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    Genomic context

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    See PF3D7_0925900 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Sequence:
    Chromosome: 9; NC_004330.2 (1040713..1041516)

    Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene histone deacetylase 1 Neighboring gene armadillo repeat protein, putative Neighboring gene protein kinase, putative Neighboring gene protein kinase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004330.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum. Burda PC, et al. Cell Rep, 2020 Jun 23. PMID 32579913
    2. A lipocalin mediates unidirectional heme biomineralization in malaria parasites. Matz JM, et al. Proc Natl Acad Sci U S A, 2020 Jul 14. PMID 32601225, Free PMC Article
    3. An in silico down-scaling approach uncovers novel constituents of the Plasmodium-containing vacuole. Matz JM, et al. Sci Rep, 2018 Sep 19. PMID 30232409, Free PMC Article
    4. Food vacuole proteome of the malarial parasite Plasmodium falciparum. Lamarque M, et al. Proteomics Clin Appl, 2008 Sep. PMID 21136929
    5. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A lipocalin mediates unidirectional heme biomineralization in malaria parasites.
      Title: A lipocalin mediates unidirectional heme biomineralization in malaria parasites.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in food vacuole HDA PubMed 
    located_in food vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in symbiont-containing vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in symbiont-containing vacuole ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    parasitophorous vacuolar protein 5, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004330.2 Reference assembly

      Range
      1040713..1041516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001352093.1 → XP_001352129.1  parasitophorous vacuolar protein 5, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001352129.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V908, A0A024X8S9, A0A0L7K8A4, Q8I2Q0, W4IHS3, W4IZH1, W7FG51, W7FZN4, W7K8C0
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials