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    PF3D7_0914000 pseudouridylate synthase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813417, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0914000
    Gene description
    pseudouridylate synthase, putative
    Locus tag
    PF3D7_0914000
    See related
    PlasmoDB:PF3D7_0914000; VEuPathDB:PF3D7_0914000
    Gene type
    protein coding
    RNA name
    pseudouridylate synthase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0914000 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Sequence:
    Chromosome: 9; NC_004330.2 (597694..600561)

    Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene arginine--tRNA ligase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene phospholipid or glycerol acyltransferase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004330.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A network-based approach reveals novel invasion and Maurer's clefts-related proteins in Plasmodium falciparum. Das D, et al. Mol Omics, 2019 Dec 2. PMID 31631203
    2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in Maurer's cleft RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in apicoplast HDA PubMed 

    General protein information

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    Preferred Names
    pseudouridylate synthase, putative
    XP_001352012.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004330.2 Reference assembly

      Range
      597694..600561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001351976.1 → XP_001352012.1  pseudouridylate synthase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001352012.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7LZ69, A0A2I0BSZ1, Q8I312
      Conserved Domains (2) summary
      PTZ00341
      Location:161 → 287
      PTZ00341; Ring-infected erythrocyte surface antigen; Provisional
      cl00130
      Location:510 → 788
      PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
    Nucleotide Protein
    Heading Accession and Version

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