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    LINC00467 long intergenic non-protein coding RNA 467 [ Homo sapiens (human) ]

    Gene ID: 84791, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC00467provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 467provided by HGNC
    Primary source
    HGNC:HGNC:28227
    See related
    Ensembl:ENSG00000153363 MIM:620079; AllianceGenome:HGNC:28227
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ASAP; C1orf97
    Expression
    Biased expression in testis (RPKM 117.7) and thyroid (RPKM 6.1) See more
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    Genomic context

    See LINC00467 in Genome Data Viewer
    Location:
    1q32.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (211382755..211432535)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (210628363..210678151)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (211556097..211605877)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2483 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1784 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2484 Neighboring gene TNF receptor associated factor 5 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1785 Neighboring gene uncharacterized LOC124904504 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:211550792-211551568 Neighboring gene uncharacterized LOC107985259 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2485 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:211571607-211572350 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:211573836-211574577 Neighboring gene sorting nexin 25 pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:211612887-211613110 Neighboring gene actin related protein 2/3 complex subunit 3 pseudogene 2 Neighboring gene RD3 regulator of GUCY2D

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • ATP synthase-associated peptide

    Clone Names

    • FLJ27347, FLJ27348, MGC14801

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026761.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK130858, BC005997, BP197632
      Related
      ENST00000656082.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      211382755..211432535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      210628363..210678151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_032705.3: Suppressed sequence

      Description
      NM_032705.3: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.